Variant report

Variant	rs555814083
Chromosome Location	chr4:60384308-60384309
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv879048	chr4:60053789-60512343	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv879050	chr4:60306500-60414423	Active TSS Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv879051	chr4:60335008-60442490	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv3339347	chr4:60382757-60387155	Enhancers Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
5	esv3429629	chr4:60383807-60386055	Active TSS Enhancers Flanking Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:60383800-60384600	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr4:60383800-60384600	Active TSS	Gastric	stomach
3	chr4:60384000-60384600	Active TSS	ES-I3 Cell Line	embryonic stem cell
4	chr4:60384000-60384600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
5	chr4:60384000-60384600	Active TSS	iPS-15b Cell Line	embryonic stem cell
6	chr4:60384200-60384400	Flanking Active TSS	Pancreas	Pancrea

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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