Variant report

Variant	rs555923929
Chromosome Location	chr7:126055286-126055287
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429810	chr7:125488049-126131049	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	nsv529300	chr7:125669493-126587858	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
3	nsv1023465	chr7:125873329-126191422	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv1028204	chr7:125897362-126225444	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
5	nsv539118	chr7:125897362-126225444	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
6	nsv1033349	chr7:126010250-126168918	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	nsv508480	chr7:126034101-126058203	Active TSS Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
8	nsv5937	chr7:126036436-126076012	Enhancers Flanking Active TSS Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
9	esv2764050	chr7:126039714-126058773	Enhancers Active TSS Flanking Active TSS Weak transcription	lncRNA	n/a	inside rSNPs	diseases
10	nsv1024506	chr7:126043644-126058773	Active TSS Enhancers Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
11	nsv1018179	chr7:126043644-126063008	Enhancers Active TSS Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
12	nsv1025757	chr7:126043644-126063431	Active TSS Flanking Active TSS Enhancers	lncRNA	n/a	inside rSNPs	diseases
13	nsv1030866	chr7:126044001-126063431	Enhancers Active TSS Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
14	nsv1026094	chr7:126044131-126055409	Active TSS Enhancers Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
15	nsv1020879	chr7:126044148-126063431	Enhancers Active TSS Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases
16	nsv1023102	chr7:126045470-126067406	Enhancers Flanking Active TSS Active TSS	lncRNA	n/a	inside rSNPs	diseases
17	nsv1024234	chr7:126045639-126066742	Enhancers Active TSS Flanking Active TSS	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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