Variant report

Variant rs556372228
Chromosome Location chr3:116143465-116143466
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:21 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:116141800-116143600 Enhancers HUES64 Cell Line embryonic stem cell
2 chr3:116141800-116143600 Enhancers Brain Germinal Matrix brain
3 chr3:116141800-116143800 Enhancers Cortex derived primary cultured neurospheres brain
4 chr3:116142000-116143600 Enhancers Rectal Smooth Muscle rectum
5 chr3:116142000-116143800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr3:116142000-116143800 Enhancers Fetal Lung lung
7 chr3:116142200-116143800 Enhancers Fetal Stomach stomach
8 chr3:116142200-116144200 Enhancers Stomach Mucosa stomach
9 chr3:116142600-116143600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr3:116142800-116144000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
11 chr3:116142800-116144000 Enhancers Pancreatic Islets Pancreatic Islet
12 chr3:116143000-116143800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
13 chr3:116143000-116144000 Enhancers Brain Anterior Caudate brain
14 chr3:116143000-116144200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:116143000-116144200 Enhancers Brain Angular Gyrus brain
16 chr3:116143000-116144400 Enhancers Brain Substantia Nigra brain
17 chr3:116143200-116144200 Enhancers Brain Cingulate Gyrus brain
18 chr3:116143200-116144200 Enhancers Brain Hippocampus Middle brain
19 chr3:116143200-116144200 Enhancers Brain Inferior Temporal Lobe brain
20 chr3:116143400-116144400 Enhancers Colon Smooth Muscle Colon
21 chr3:116143400-116161200 Weak transcription iPS-18 Cell Line embryonic stem cell

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