The 2.0 version of rSNPBase

Variant report

Variant rs55679447
Chromosome Location chr2:37340683-37340684
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:37312200-37346000 Weak transcription Pancreas Pancrea
2 chr2:37312200-37383200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr2:37313200-37346000 Weak transcription Stomach Mucosa stomach
4 chr2:37313400-37361800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr2:37314400-37347000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr2:37314600-37346800 Strong transcription Primary T helper cells fromperipheralblood blood
7 chr2:37315600-37367000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:37315800-37341200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr2:37315800-37341400 Strong transcription Duodenum Smooth Muscle Duodenum
10 chr2:37319000-37341200 Strong transcription Rectal Mucosa Donor 29 rectum
11 chr2:37319000-37346600 Strong transcription Breast Myoepithelial Primary Cells Breast
12 chr2:37319000-37347000 Strong transcription Dnd41 blood
13 chr2:37319200-37377200 Strong transcription Primary monocytes fromperipheralblood blood
14 chr2:37320000-37346600 Strong transcription Monocytes-CD14+_RO01746 blood
15 chr2:37320600-37368000 Strong transcription Primary neutrophils fromperipheralblood blood
16 chr2:37321600-37344800 Weak transcription Gastric stomach
17 chr2:37321600-37348600 Weak transcription Colonic Mucosa Colon
18 chr2:37322400-37352200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
19 chr2:37324800-37344400 Strong transcription Adipose Nuclei Adipose
20 chr2:37326800-37346600 Strong transcription GM12878-XiMat blood
21 chr2:37327000-37349200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
22 chr2:37328200-37349000 Weak transcription Aorta Aorta
23 chr2:37329400-37345600 Weak transcription NHLF lung
24 chr2:37331000-37341600 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr2:37331200-37348800 Weak transcription K562 blood
26 chr2:37331400-37346800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:37331600-37347200 Strong transcription Primary B cells from peripheral blood blood
28 chr2:37331600-37347400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr2:37332400-37341200 Strong transcription Primary T cells fromperipheralblood blood
30 chr2:37332400-37344000 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr2:37332600-37346600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr2:37332600-37375200 Strong transcription Liver Liver
33 chr2:37332800-37346600 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr2:37332800-37351200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:37333200-37341200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr2:37333200-37379600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr2:37333400-37362400 Weak transcription ES-I3 Cell Line embryonic stem cell
38 chr2:37333400-37366400 Weak transcription iPS-15b Cell Line embryonic stem cell
39 chr2:37333800-37346000 Strong transcription HepG2 liver
40 chr2:37334000-37346000 Weak transcription Small Intestine intestine
41 chr2:37334400-37341400 Strong transcription NHDF-Ad bronchial
42 chr2:37335600-37370400 Weak transcription Fetal Heart heart
43 chr2:37335800-37345800 Weak transcription Primary T killer naive cells fromperipheralblood blood
44 chr2:37336200-37346000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr2:37336400-37343600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr2:37336400-37383200 Weak transcription Psoas Muscle Psoas
47 chr2:37336600-37343400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr2:37336600-37343600 Weak transcription Fetal Kidney kidney
49 chr2:37336600-37343600 Weak transcription Placenta Amnion Placenta Amnion
50 chr2:37336600-37346000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015