Variant report

Variant rs55760800
Chromosome Location chr17:43996908-43996909
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43992200-44000000 Weak transcription HepG2 liver
2 chr17:43993000-43997000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr17:43994400-43997200 Weak transcription Brain Hippocampus Middle brain
4 chr17:43994400-43997400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr17:43994600-44000200 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr17:43994800-44001400 Weak transcription Fetal Brain Female brain
7 chr17:43995000-44000600 Weak transcription Right Atrium heart
8 chr17:43995400-43997400 Enhancers Skeletal Muscle Female skeletal muscle
9 chr17:43995600-43997200 Enhancers Skeletal Muscle Male skeletal muscle
10 chr17:43996000-43997200 Enhancers Brain Inferior Temporal Lobe brain
11 chr17:43996200-43997800 Weak transcription Liver Liver
12 chr17:43996600-44002800 Enhancers Brain Substantia Nigra brain
13 chr17:43996600-44003000 Enhancers Brain Angular Gyrus brain
14 chr17:43996800-43997000 Bivalent Enhancer Fetal Muscle Trunk muscle
15 chr17:43996800-43997400 Weak transcription Psoas Muscle Psoas
16 chr17:43996800-43998200 Strong transcription Brain Germinal Matrix brain
17 chr17:43996800-43999200 Enhancers Brain Anterior Caudate brain
18 chr17:43996800-44002600 Enhancers Brain Cingulate Gyrus brain

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