Variant report

Variant	rs557789473
Chromosome Location	chr8:63517909-63517910
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018879	chr8:63281724-63937632	Enhancers Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv831340	chr8:63515126-63702660	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv890960	chr8:63516962-63629549	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63515000-63518000	Enhancers	Fetal Lung	lung
2	chr8:63516000-63519200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr8:63516800-63518600	Weak transcription	Fetal Kidney	kidney
4	chr8:63517000-63518400	Weak transcription	H9 Cell Line	embryonic stem cell
5	chr8:63517000-63518600	Weak transcription	H1 Cell Line	embryonic stem cell
6	chr8:63517000-63518600	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr8:63517000-63518600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr8:63517000-63518600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr8:63517000-63521400	Weak transcription	Fetal Brain Female	brain
10	chr8:63517200-63518600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr8:63517200-63518800	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr8:63517600-63519800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links