Variant report
| Variant | rs55780087 |
|---|---|
| Chromosome Location | chr14:65820592-65820593 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr14:65803400-65821000 | Weak transcription | Esophagus | oesophagus |
| 2 | chr14:65812000-65822800 | Weak transcription | Gastric | stomach |
| 3 | chr14:65813800-65821200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 4 | chr14:65813800-65823600 | Weak transcription | Thymus | Thymus |
| 5 | chr14:65814000-65821400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 6 | chr14:65814000-65823400 | Weak transcription | Small Intestine | intestine |
| 7 | chr14:65814000-65824800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 8 | chr14:65814200-65822200 | Weak transcription | Primary T cells from cord blood | blood |
| 9 | chr14:65814800-65820800 | Weak transcription | Duodenum Mucosa | Duodenum |
| 10 | chr14:65814800-65823200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 11 | chr14:65815400-65821200 | Weak transcription | Brain Hippocampus Middle | brain |
| 12 | chr14:65815400-65824000 | Weak transcription | Brain Angular Gyrus | brain |
| 13 | chr14:65816000-65821200 | Weak transcription | Pancreas | Pancrea |
| 14 | chr14:65816000-65822800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr14:65816600-65820600 | Weak transcription | Fetal Intestine Large | intestine |
| 16 | chr14:65816800-65821200 | Enhancers | Primary B cells from cord blood | blood |
| 17 | chr14:65816800-65828000 | Enhancers | Primary B cells from peripheral blood | blood |
| 18 | chr14:65817200-65821000 | Weak transcription | Fetal Intestine Small | intestine |
| 19 | chr14:65818000-65823400 | Enhancers | GM12878-XiMat | blood |
| 20 | chr14:65819600-65823200 | Enhancers | Hela-S3 | cervix |
| 21 | chr14:65819600-65823400 | Enhancers | HMEC | breast |
| 22 | chr14:65819600-65823400 | Enhancers | NHEK | skin |
| 23 | chr14:65819600-65823600 | Enhancers | Stomach Mucosa | stomach |
| 24 | chr14:65819600-65824400 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 25 | chr14:65819600-65824800 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 26 | chr14:65819800-65821000 | Enhancers | Rectal Mucosa Donor 31 | rectum |
| 27 | chr14:65819800-65821400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 28 | chr14:65819800-65824400 | Enhancers | Placenta | Placenta |
| 29 | chr14:65819800-65824600 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 30 | chr14:65819800-65824800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 31 | chr14:65820000-65821200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 32 | chr14:65820000-65821200 | Weak transcription | Psoas Muscle | Psoas |
| 33 | chr14:65820000-65822400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 34 | chr14:65820000-65823600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 35 | chr14:65820200-65821400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 36 | chr14:65820200-65822400 | Weak transcription | NHDF-Ad | bronchial |
| 37 | chr14:65820200-65823000 | Weak transcription | HUVEC | blood vessel |
| 38 | chr14:65820200-65823200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 39 | chr14:65820200-65823200 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 40 | chr14:65820400-65822800 | Weak transcription | HSMM | muscle |
| 41 | chr14:65820400-65823000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 42 | chr14:65820400-65823000 | Weak transcription | Osteobl | bone |
| 43 | chr14:65820400-65823200 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 44 | chr14:65820400-65823400 | Weak transcription | A549 | lung |
