The 2.0 version of rSNPBase

Variant report

Variant rs55790407
Chromosome Location chr17:43512439-43512440
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43509200-43516200 Weak transcription HSMMtube muscle
2 chr17:43509800-43523600 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr17:43510000-43512800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
4 chr17:43510000-43512800 Weak transcription Brain Inferior Temporal Lobe brain
5 chr17:43510000-43512800 Weak transcription NHLF lung
6 chr17:43510000-43513000 Weak transcription Gastric stomach
7 chr17:43510000-43513600 Weak transcription Aorta Aorta
8 chr17:43510000-43513600 Weak transcription Brain Angular Gyrus brain
9 chr17:43510000-43513600 Weak transcription A549 lung
10 chr17:43510000-43517800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
11 chr17:43510000-43523000 Weak transcription HSMM muscle
12 chr17:43510000-43523200 Weak transcription NHDF-Ad bronchial
13 chr17:43510200-43548200 Weak transcription Pancreatic Islets Pancreatic Islet
14 chr17:43510400-43512800 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr17:43510400-43513200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr17:43510400-43513400 Weak transcription Primary T cells from cord blood blood
17 chr17:43510400-43513400 Weak transcription Placenta Amnion Placenta Amnion
18 chr17:43510400-43513400 Weak transcription Thymus Thymus
19 chr17:43510400-43513600 Weak transcription Duodenum Mucosa Duodenum
20 chr17:43510400-43514800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr17:43510400-43539200 Weak transcription Osteobl bone
22 chr17:43510600-43513000 Weak transcription Primary B cells from peripheral blood blood
23 chr17:43510600-43513200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr17:43510600-43513200 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr17:43510600-43513200 Weak transcription Right Ventricle heart
26 chr17:43510600-43513400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr17:43510600-43513400 Weak transcription Rectal Smooth Muscle rectum
28 chr17:43510600-43513600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr17:43510600-43514600 Weak transcription Primary T helper cells PMA-I stimulated --
30 chr17:43510600-43514600 Weak transcription Small Intestine intestine
31 chr17:43510600-43523600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr17:43510800-43512600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr17:43510800-43512600 Weak transcription Fetal Intestine Large intestine
34 chr17:43510800-43512600 Weak transcription Rectal Mucosa Donor 29 rectum
35 chr17:43510800-43512600 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr17:43510800-43513000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr17:43510800-43513000 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr17:43510800-43513000 Weak transcription Brain Anterior Caudate brain
39 chr17:43510800-43513000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr17:43510800-43513000 Weak transcription Dnd41 blood
41 chr17:43510800-43513200 Weak transcription Primary T cells fromperipheralblood blood
42 chr17:43510800-43513400 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr17:43510800-43513400 Weak transcription Colonic Mucosa Colon
44 chr17:43510800-43513600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr17:43510800-43513600 Weak transcription Pancreas Pancrea
46 chr17:43510800-43513800 Weak transcription Muscle Satellite Cultured Cells --
47 chr17:43510800-43516200 Weak transcription Primary B cells from cord blood blood
48 chr17:43510800-43516600 Weak transcription Psoas Muscle Psoas
49 chr17:43510800-43517200 Weak transcription Hela-S3 cervix
50 chr17:43510800-43517200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015