The 2.0 version of rSNPBase

Variant report

Variant rs55826634
Chromosome Location chr2:128164021-128164022
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128146400-128165200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr2:128150400-128165000 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr2:128152600-128165800 Weak transcription Aorta Aorta
4 chr2:128155800-128164800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr2:128156200-128165200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr2:128156400-128164200 Weak transcription Muscle Satellite Cultured Cells --
7 chr2:128156800-128165200 Weak transcription Pancreas Pancrea
8 chr2:128157000-128165400 Weak transcription Psoas Muscle Psoas
9 chr2:128159200-128164800 Weak transcription NHDF-Ad bronchial
10 chr2:128159200-128165000 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr2:128159200-128165200 Weak transcription Right Ventricle heart
12 chr2:128159200-128165200 Weak transcription NHLF lung
13 chr2:128159400-128165000 Weak transcription Osteobl bone
14 chr2:128159400-128165200 Weak transcription HSMM muscle
15 chr2:128159600-128164800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
16 chr2:128159800-128164600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:128159800-128165000 Weak transcription NH-A brain
18 chr2:128159800-128165200 Weak transcription Placenta Placenta
19 chr2:128160200-128164400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:128160200-128164800 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr2:128160200-128165000 Weak transcription Stomach Mucosa stomach
22 chr2:128160200-128165000 Weak transcription Hela-S3 cervix
23 chr2:128160200-128165200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr2:128160400-128164800 Weak transcription Placenta Amnion Placenta Amnion
25 chr2:128160800-128165200 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr2:128161400-128164600 Weak transcription Fetal Muscle Leg muscle
27 chr2:128161400-128165400 Weak transcription Ovary ovary
28 chr2:128162000-128165800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr2:128162200-128164400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr2:128162200-128165600 Enhancers NHEK skin
31 chr2:128162400-128164600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr2:128162400-128165200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr2:128162600-128164800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr2:128162800-128164200 Weak transcription Fetal Thymus thymus
35 chr2:128162800-128164800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr2:128162800-128164800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr2:128162800-128165000 Weak transcription iPS-20b Cell Line embryonic stem cell
38 chr2:128162800-128165000 Weak transcription Primary hematopoietic stem cells blood
39 chr2:128163000-128164400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr2:128163000-128164800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr2:128163000-128165000 Weak transcription iPS-15b Cell Line embryonic stem cell
42 chr2:128163000-128165000 Weak transcription Primary hematopoietic stem cells short term culture blood
43 chr2:128163000-128165000 Weak transcription GM12878-XiMat blood
44 chr2:128163000-128165200 Weak transcription H1 Cell Line embryonic stem cell
45 chr2:128163000-128165200 Weak transcription H9 Cell Line embryonic stem cell
46 chr2:128163000-128165200 Weak transcription Primary B cells from peripheral blood blood
47 chr2:128163000-128165200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
48 chr2:128163200-128164200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr2:128163200-128164400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr2:128163200-128164400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015