Variant report

Variant rs558407787
Chromosome Location chr13:51287347-51287348
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:51269400-51296800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr13:51282600-51287400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr13:51282600-51287400 Enhancers Fetal Heart heart
4 chr13:51282800-51287400 Weak transcription Primary B cells from cord blood blood
5 chr13:51282800-51287600 Weak transcription Thymus Thymus
6 chr13:51284400-51287400 Enhancers Fetal Lung lung
7 chr13:51285000-51289400 Enhancers Fetal Muscle Leg muscle
8 chr13:51285000-51290000 Weak transcription Brain Substantia Nigra brain
9 chr13:51285200-51288000 Weak transcription HepG2 liver
10 chr13:51285400-51288200 Enhancers Fetal Brain Male brain
11 chr13:51285600-51288200 Enhancers Fetal Brain Female brain
12 chr13:51285800-51287600 Enhancers Primary monocytes fromperipheralblood blood
13 chr13:51286200-51287800 Enhancers Primary neutrophils fromperipheralblood blood
14 chr13:51286200-51288600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr13:51286200-51290600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
16 chr13:51286400-51287800 Weak transcription Brain Hippocampus Middle brain
17 chr13:51286400-51288000 Enhancers Adipose Nuclei Adipose
18 chr13:51286400-51288800 Weak transcription Brain Cingulate Gyrus brain
19 chr13:51286400-51288800 Enhancers HSMM muscle
20 chr13:51286600-51289000 Enhancers HSMMtube muscle
21 chr13:51286800-51287400 Enhancers Fetal Kidney kidney
22 chr13:51286800-51287400 Flanking Active TSS NHDF-Ad bronchial
23 chr13:51286800-51287600 Enhancers Primary hematopoietic stem cells blood
24 chr13:51286800-51287800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr13:51286800-51288600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr13:51287000-51287400 Enhancers Fetal Intestine Small intestine
27 chr13:51287000-51287400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
28 chr13:51287000-51287600 Enhancers Rectal Mucosa Donor 31 rectum
29 chr13:51287000-51287800 Enhancers Primary hematopoietic stem cells short term culture blood
30 chr13:51287000-51288200 Enhancers Psoas Muscle Psoas
31 chr13:51287000-51288600 Flanking Active TSS Dnd41 blood
32 chr13:51287200-51287400 Enhancers Fetal Intestine Large intestine
33 chr13:51287200-51287400 Enhancers Fetal Stomach stomach
34 chr13:51287200-51287400 Enhancers Rectal Smooth Muscle rectum
35 chr13:51287200-51287600 Enhancers Primary T cells from cord blood blood
36 chr13:51287200-51287800 Enhancers Duodenum Mucosa Duodenum
37 chr13:51287200-51288000 Enhancers Primary B cells from peripheral blood blood
38 chr13:51287200-51288000 Enhancers Primary T cells fromperipheralblood blood
39 chr13:51287200-51288400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr13:51287200-51289000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
41 chr13:51287200-51289200 Enhancers Fetal Thymus thymus

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