The 2.0 version of rSNPBase

Variant report

Variant rs558688456
Chromosome Location chr15:76762721-76762722
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:76711600-76767200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr15:76720800-76763600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr15:76725800-76812600 Weak transcription Left Ventricle heart
4 chr15:76750400-76763800 Weak transcription Placenta Placenta
5 chr15:76753200-76762800 Weak transcription Esophagus oesophagus
6 chr15:76753800-76764400 Weak transcription Fetal Intestine Large intestine
7 chr15:76754000-76764400 Weak transcription Brain Hippocampus Middle brain
8 chr15:76754200-76763600 Weak transcription Pancreas Pancrea
9 chr15:76754400-76763600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr15:76754800-76764400 Weak transcription Fetal Muscle Trunk muscle
11 chr15:76755600-76764600 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr15:76757800-76765200 Weak transcription Aorta Aorta
13 chr15:76758400-76765600 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr15:76758800-76764400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr15:76758800-76765000 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr15:76758800-76765200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr15:76759200-76763800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr15:76759200-76764400 Weak transcription Psoas Muscle Psoas
19 chr15:76759400-76763600 Strong transcription Liver Liver
20 chr15:76759400-76764400 Weak transcription Fetal Muscle Leg muscle
21 chr15:76759800-76762800 Weak transcription Duodenum Mucosa Duodenum
22 chr15:76759800-76763400 Weak transcription Primary T killer naive cells fromperipheralblood blood
23 chr15:76759800-76770400 Weak transcription Colon Smooth Muscle Colon
24 chr15:76760000-76772600 Weak transcription GM12878-XiMat blood
25 chr15:76760400-76773800 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr15:76760600-76763000 Weak transcription Right Ventricle heart
27 chr15:76760600-76764200 Weak transcription Primary monocytes fromperipheralblood blood
28 chr15:76760800-76763000 Strong transcription Primary B cells from cord blood blood
29 chr15:76760800-76763000 Strong transcription Duodenum Smooth Muscle Duodenum
30 chr15:76760800-76763400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
31 chr15:76760800-76763400 Weak transcription Brain Angular Gyrus brain
32 chr15:76760800-76764200 Strong transcription Primary T helper cells fromperipheralblood blood
33 chr15:76761000-76763200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr15:76761000-76763400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr15:76761000-76763600 Strong transcription Primary T cells fromperipheralblood blood
36 chr15:76761200-76762800 Strong transcription Rectal Mucosa Donor 29 rectum
37 chr15:76761200-76762800 Strong transcription Stomach Smooth Muscle stomach
38 chr15:76761200-76762800 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr15:76761200-76763400 Strong transcription Primary B cells from peripheral blood blood
40 chr15:76761200-76764800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr15:76761400-76762800 Weak transcription Small Intestine intestine
42 chr15:76761400-76763600 Weak transcription Brain Anterior Caudate brain
43 chr15:76761400-76765400 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr15:76761600-76763200 Strong transcription Adipose Nuclei Adipose
45 chr15:76761800-76762800 Strong transcription Dnd41 blood
46 chr15:76761800-76763400 Strong transcription Skeletal Muscle Female skeletal muscle
47 chr15:76761800-76764200 Strong transcription Primary T cells from cord blood blood
48 chr15:76762000-76763000 Strong transcription Primary hematopoietic stem cells blood
49 chr15:76762000-76763000 Strong transcription Ovary ovary
50 chr15:76762000-76771400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015