Variant report

Variant	rs558771266
Chromosome Location	chr1:215167752-215167753
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv468105	chr1:215167236-215248417	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv549182	chr1:215167236-215248417	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:215163800-215168200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:215164200-215167800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr1:215164200-215174800	Weak transcription	NH-A	brain
4	chr1:215164800-215175000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr1:215166600-215168000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr1:215166800-215168000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr1:215167200-215170600	Weak transcription	Osteobl	bone
8	chr1:215167400-215174600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr1:215167600-215168000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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