Variant report

Variant rs55900347
Chromosome Location chr17:44176092-44176093
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44128200-44184400 Weak transcription Colonic Mucosa Colon
2 chr17:44141000-44182600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr17:44144200-44184400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr17:44144200-44206000 Weak transcription Esophagus oesophagus
5 chr17:44145000-44178400 Weak transcription Stomach Smooth Muscle stomach
6 chr17:44150600-44184400 Weak transcription H9 Cell Line embryonic stem cell
7 chr17:44151000-44178200 Weak transcription HMEC breast
8 chr17:44151200-44177000 Weak transcription NH-A brain
9 chr17:44151600-44178000 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr17:44152200-44183000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr17:44156600-44178000 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr17:44156800-44177400 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr17:44160200-44181000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr17:44160400-44176200 Weak transcription Brain Cingulate Gyrus brain
15 chr17:44160400-44177400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr17:44161400-44177200 Weak transcription Stomach Mucosa stomach
17 chr17:44161400-44178800 Weak transcription Small Intestine intestine
18 chr17:44162000-44183000 Weak transcription Gastric stomach
19 chr17:44162000-44190200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr17:44163000-44184400 Weak transcription Spleen Spleen
21 chr17:44164400-44185400 Weak transcription Lung lung
22 chr17:44164400-44193200 Weak transcription Fetal Stomach stomach
23 chr17:44164600-44185400 Weak transcription Pancreas Pancrea
24 chr17:44164800-44179600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
25 chr17:44164800-44183400 Weak transcription Right Ventricle heart
26 chr17:44166200-44178200 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr17:44166200-44182800 Weak transcription Ovary ovary
28 chr17:44168200-44193200 Weak transcription Fetal Brain Female brain
29 chr17:44168400-44176800 Weak transcription Primary T cells from cord blood blood
30 chr17:44169400-44176200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr17:44169600-44178000 Weak transcription NHLF lung
32 chr17:44169600-44178400 Weak transcription H1 Cell Line embryonic stem cell
33 chr17:44169600-44184400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr17:44169600-44184400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr17:44169800-44177400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr17:44171000-44178000 Weak transcription Osteobl bone
37 chr17:44171400-44178000 Weak transcription Adipose Nuclei Adipose
38 chr17:44171800-44177200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
39 chr17:44172000-44176800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
40 chr17:44172000-44176800 Weak transcription Duodenum Mucosa Duodenum
41 chr17:44172000-44177000 Weak transcription Breast Myoepithelial Primary Cells Breast
42 chr17:44172000-44177400 Weak transcription HUVEC blood vessel
43 chr17:44172000-44178000 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr17:44172000-44178000 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr17:44172000-44178800 Weak transcription Rectal Mucosa Donor 31 rectum
46 chr17:44172000-44180400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr17:44172000-44182800 Weak transcription Thymus Thymus
48 chr17:44172000-44199600 Weak transcription Placenta Placenta
49 chr17:44172200-44176200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
50 chr17:44172200-44176200 Weak transcription Brain Substantia Nigra brain

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