Variant report

Variant rs55915917
Chromosome Location chr17:43892784-43892785
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:18 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43889600-43892800 Enhancers Brain Anterior Caudate brain
2 chr17:43889800-43892800 Enhancers Brain Hippocampus Middle brain
3 chr17:43889800-43892800 Enhancers Brain Substantia Nigra brain
4 chr17:43889800-43893600 Enhancers Brain Inferior Temporal Lobe brain
5 chr17:43891200-43896000 Weak transcription Fetal Brain Male brain
6 chr17:43891200-43902400 Weak transcription Brain Germinal Matrix brain
7 chr17:43891600-43894200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr17:43891600-43894400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr17:43891800-43892800 Enhancers Fetal Muscle Trunk muscle
10 chr17:43891800-43894400 Bivalent Enhancer HepG2 liver
11 chr17:43892000-43892800 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr17:43892000-43892800 Enhancers Skeletal Muscle Female skeletal muscle
13 chr17:43892200-43892800 Enhancers Liver Liver
14 chr17:43892200-43895600 Weak transcription Brain Angular Gyrus brain
15 chr17:43892400-43892800 Enhancers Cortex derived primary cultured neurospheres brain
16 chr17:43892400-43897400 Weak transcription Fetal Brain Female brain
17 chr17:43892600-43893200 Weak transcription Brain Cingulate Gyrus brain
18 chr17:43892600-43899000 Weak transcription Right Ventricle heart

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