The 2.0 version of rSNPBase

Variant report

Variant rs55924076
Chromosome Location chr11:47009860-47009861
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46980600-47014000 Weak transcription Aorta Aorta
2 chr11:46980600-47021000 Weak transcription Ovary ovary
3 chr11:46980600-47026000 Weak transcription HSMM muscle
4 chr11:46981200-47023400 Weak transcription Primary B cells from peripheral blood blood
5 chr11:46983000-47024000 Weak transcription Primary B cells from cord blood blood
6 chr11:46989200-47026000 Weak transcription Dnd41 blood
7 chr11:46994000-47026000 Weak transcription Colonic Mucosa Colon
8 chr11:46994200-47021000 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr11:46994400-47014800 Weak transcription Esophagus oesophagus
10 chr11:46996000-47011400 Weak transcription Pancreas Pancrea
11 chr11:46996000-47025800 Weak transcription Fetal Muscle Trunk muscle
12 chr11:46998800-47023200 Weak transcription Fetal Brain Male brain
13 chr11:46999000-47010600 Weak transcription Fetal Muscle Leg muscle
14 chr11:46999000-47019400 Weak transcription Fetal Stomach stomach
15 chr11:46999200-47010000 Weak transcription Fetal Brain Female brain
16 chr11:46999600-47011000 Weak transcription Fetal Lung lung
17 chr11:46999600-47013000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr11:46999600-47023600 Weak transcription Stomach Smooth Muscle stomach
19 chr11:47000000-47010800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:47000000-47011200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr11:47000000-47012800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr11:47000000-47024600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr11:47000200-47025200 Weak transcription NH-A brain
24 chr11:47000200-47026400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr11:47000400-47012000 Weak transcription HUES6 Cell Line embryonic stem cell
26 chr11:47000400-47012600 Weak transcription iPS-18 Cell Line embryonic stem cell
27 chr11:47000400-47012800 Weak transcription iPS-20b Cell Line embryonic stem cell
28 chr11:47000400-47023400 Weak transcription Osteobl bone
29 chr11:47000400-47024600 Weak transcription Brain Cingulate Gyrus brain
30 chr11:47000400-47026600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr11:47000600-47012600 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr11:47000800-47010800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr11:47001000-47013000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr11:47002000-47012600 Weak transcription HUES64 Cell Line embryonic stem cell
35 chr11:47002000-47017600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr11:47002200-47010000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr11:47002200-47012800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr11:47003400-47015600 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr11:47003400-47021000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr11:47003400-47032800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr11:47003600-47013200 Weak transcription Primary T cells fromperipheralblood blood
42 chr11:47003600-47014800 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr11:47003600-47015000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr11:47003600-47024600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
45 chr11:47005400-47026200 Weak transcription Fetal Intestine Large intestine
46 chr11:47005600-47011000 Weak transcription Duodenum Mucosa Duodenum
47 chr11:47005800-47019600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr11:47005800-47024000 Weak transcription K562 blood
49 chr11:47005800-47025800 Weak transcription HSMMtube muscle
50 chr11:47006000-47023600 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015