Variant report

Variant rs559307595
Chromosome Location chr17:43657220-43657221
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43640800-43660200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
2 chr17:43646000-43660200 Weak transcription Primary B cells from peripheral blood blood
3 chr17:43647800-43659000 Weak transcription Primary T cells fromperipheralblood blood
4 chr17:43649600-43658600 Weak transcription Primary T cells from cord blood blood
5 chr17:43649600-43659200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr17:43649600-43659200 Weak transcription Fetal Brain Female brain
7 chr17:43649800-43660200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr17:43651200-43660800 Weak transcription Aorta Aorta
9 chr17:43651400-43658800 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr17:43651800-43659800 Weak transcription Fetal Lung lung
11 chr17:43652400-43660400 Weak transcription Adipose Nuclei Adipose
12 chr17:43652400-43660400 Weak transcription Fetal Intestine Large intestine
13 chr17:43652600-43657400 Weak transcription Colon Smooth Muscle Colon
14 chr17:43652600-43660400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr17:43652600-43660400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr17:43652600-43661400 Weak transcription Ovary ovary
17 chr17:43652800-43659000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr17:43652800-43660400 Weak transcription NH-A brain
19 chr17:43652800-43661000 Weak transcription HSMMtube muscle
20 chr17:43653000-43658400 Weak transcription Fetal Stomach stomach
21 chr17:43653000-43660400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr17:43653000-43661000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr17:43653000-43661000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr17:43653000-43661200 Weak transcription Lung lung
25 chr17:43653200-43658400 Weak transcription NHLF lung
26 chr17:43653200-43658800 Weak transcription HUVEC blood vessel
27 chr17:43653200-43659400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr17:43653200-43660200 Weak transcription Stomach Smooth Muscle stomach
29 chr17:43653200-43661000 Weak transcription Osteobl bone
30 chr17:43653400-43661800 Weak transcription Spleen Spleen
31 chr17:43654600-43657400 Enhancers Colonic Mucosa Colon
32 chr17:43654600-43657800 Genic enhancers Rectal Mucosa Donor 29 rectum
33 chr17:43654800-43660400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr17:43654800-43660400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr17:43654800-43660800 Weak transcription H9 Cell Line embryonic stem cell
36 chr17:43655000-43660400 Enhancers Primary T helper cells PMA-I stimulated --
37 chr17:43655200-43658800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr17:43655400-43658400 Weak transcription Fetal Brain Male brain
39 chr17:43655400-43658600 Weak transcription Fetal Thymus thymus
40 chr17:43655600-43657400 Strong transcription Primary hematopoietic stem cells short term culture blood
41 chr17:43655600-43659800 Strong transcription Primary B cells from cord blood blood
42 chr17:43656000-43657600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
43 chr17:43656000-43657600 Enhancers Brain Inferior Temporal Lobe brain
44 chr17:43656200-43657600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr17:43656200-43657600 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
46 chr17:43656200-43657600 Enhancers Rectal Mucosa Donor 31 rectum
47 chr17:43656200-43657600 Enhancers Skeletal Muscle Female skeletal muscle
48 chr17:43656200-43657600 Enhancers Stomach Mucosa stomach
49 chr17:43656200-43657800 Enhancers H1 Cell Line embryonic stem cell
50 chr17:43656200-43657800 Enhancers Primary T killer naive cells fromperipheralblood blood

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