The 2.0 version of rSNPBase

Variant report

Variant rs559329593
Chromosome Location chr8:100214608-100214609
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100163400-100224800 Weak transcription Duodenum Mucosa Duodenum
2 chr8:100163400-100225000 Weak transcription Fetal Thymus thymus
3 chr8:100163400-100226800 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr8:100163400-100226800 Weak transcription Fetal Muscle Trunk muscle
5 chr8:100163400-100230600 Weak transcription Right Ventricle heart
6 chr8:100164000-100225600 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr8:100164000-100229600 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr8:100164200-100245000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr8:100175400-100222800 Weak transcription Fetal Stomach stomach
10 chr8:100176200-100222600 Weak transcription Fetal Intestine Large intestine
11 chr8:100178800-100245000 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr8:100178800-100245000 Weak transcription Fetal Intestine Small intestine
13 chr8:100179200-100217000 Weak transcription Adipose Nuclei Adipose
14 chr8:100179200-100223000 Weak transcription Fetal Muscle Leg muscle
15 chr8:100179200-100229600 Weak transcription Fetal Lung lung
16 chr8:100179400-100216800 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr8:100188000-100230800 Weak transcription Left Ventricle heart
18 chr8:100198400-100220000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr8:100198400-100245800 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr8:100201400-100245200 Weak transcription Primary hematopoietic stem cells short term culture blood
21 chr8:100202200-100243600 Weak transcription Sigmoid Colon Sigmoid Colon
22 chr8:100202600-100215600 Weak transcription K562 blood
23 chr8:100203000-100220800 Weak transcription HepG2 liver
24 chr8:100203000-100222600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr8:100203000-100230000 Weak transcription HSMMtube muscle
26 chr8:100203000-100236200 Weak transcription HSMM muscle
27 chr8:100203400-100215400 Weak transcription A549 lung
28 chr8:100203600-100216400 Weak transcription Osteobl bone
29 chr8:100203600-100217200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr8:100203600-100229400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr8:100203600-100229800 Weak transcription NH-A brain
32 chr8:100203600-100230200 Weak transcription Ovary ovary
33 chr8:100203800-100215400 Weak transcription iPS-18 Cell Line embryonic stem cell
34 chr8:100203800-100219200 Weak transcription iPS-20b Cell Line embryonic stem cell
35 chr8:100203800-100245600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr8:100204200-100227800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr8:100204200-100229400 Weak transcription NHDF-Ad bronchial
38 chr8:100204200-100248200 Weak transcription Esophagus oesophagus
39 chr8:100204400-100216200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
40 chr8:100205000-100216400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr8:100205200-100241600 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr8:100205600-100230400 Weak transcription Stomach Smooth Muscle stomach
43 chr8:100206800-100215200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr8:100207000-100245600 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr8:100207000-100290400 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr8:100208000-100218400 Weak transcription Pancreatic Islets Pancreatic Islet
47 chr8:100209000-100223200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr8:100209200-100222400 Weak transcription Primary T cells from cord blood blood
49 chr8:100209200-100223400 Weak transcription Fetal Kidney kidney
50 chr8:100209200-100225600 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015