The 2.0 version of rSNPBase

Variant report

Variant rs55947965
Chromosome Location chr8:99635644-99635645
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:99606800-99635800 Weak transcription Aorta Aorta
2 chr8:99606800-99637400 Weak transcription Ovary ovary
3 chr8:99611800-99639800 Weak transcription Small Intestine intestine
4 chr8:99621800-99651400 Weak transcription Left Ventricle heart
5 chr8:99621800-99663000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr8:99625400-99635800 Weak transcription Skeletal Muscle Female skeletal muscle
7 chr8:99625400-99643400 Weak transcription NHEK skin
8 chr8:99625600-99638200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr8:99625600-99645000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr8:99626600-99637400 Weak transcription Fetal Lung lung
11 chr8:99626600-99642200 Weak transcription Dnd41 blood
12 chr8:99627200-99637400 Weak transcription HUES6 Cell Line embryonic stem cell
13 chr8:99630000-99662600 Weak transcription Pancreas Pancrea
14 chr8:99631800-99645400 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr8:99632200-99635800 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr8:99632200-99635800 Weak transcription Liver Liver
17 chr8:99632200-99636000 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr8:99632200-99637800 Weak transcription Rectal Smooth Muscle rectum
19 chr8:99632200-99646800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr8:99632200-99651400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr8:99633400-99637400 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr8:99633400-99652000 Weak transcription Primary hematopoietic stem cells blood
23 chr8:99633600-99642200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr8:99633800-99635800 Weak transcription Psoas Muscle Psoas
25 chr8:99633800-99636000 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr8:99633800-99650800 Weak transcription Right Ventricle heart
27 chr8:99634000-99637800 Weak transcription Colon Smooth Muscle Colon
28 chr8:99634000-99643200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr8:99634200-99635800 Weak transcription Fetal Muscle Leg muscle
30 chr8:99634400-99635800 Weak transcription Adipose Nuclei Adipose
31 chr8:99634400-99658000 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr8:99634600-99636000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr8:99634600-99636200 Weak transcription Fetal Muscle Trunk muscle
34 chr8:99634800-99637200 Weak transcription Thymus Thymus
35 chr8:99634800-99637400 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr8:99635000-99636000 Weak transcription Stomach Smooth Muscle stomach
37 chr8:99635200-99635800 Weak transcription Esophagus oesophagus
38 chr8:99635200-99637200 Strong transcription Placenta Placenta
39 chr8:99635400-99636200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr8:99635400-99636200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr8:99635400-99651600 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr8:99635600-99636200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr8:99635600-99636200 Strong transcription Fetal Intestine Small intestine
44 chr8:99635600-99636200 ZNF genes & repeats Lung lung
45 chr8:99635600-99636400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr8:99635600-99636400 Strong transcription Fetal Intestine Large intestine
47 chr8:99635600-99636400 Strong transcription Placenta Amnion Placenta Amnion
48 chr8:99635600-99636600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr8:99635600-99636800 Strong transcription Duodenum Mucosa Duodenum
50 chr8:99635600-99637200 Weak transcription Brain Anterior Caudate brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015