Variant report

Variant	rs559512257
Chromosome Location	chr11:75968380-75968381
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1049039	chr11:75827548-76023665	Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
2	nsv897926	chr11:75862571-76004202	Enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
3	nsv1040118	chr11:75870189-75995089	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
4	nsv1053129	chr11:75871240-75997663	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
5	nsv897930	chr11:75960472-76027936	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	esv12458	chr11:75967239-75969847	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
7	nsv528902	chr11:75967695-75973078	Bivalent Enhancer Enhancers Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:75962600-75983600	Weak transcription	Spleen	Spleen
2	chr11:75963200-75976000	Weak transcription	Right Atrium	heart
3	chr11:75965200-75974000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr11:75967400-75968800	Enhancers	Fetal Brain Male	brain
5	chr11:75967600-75968400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr11:75967600-75968600	Enhancers	Placenta	Placenta
7	chr11:75967600-75968800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
8	chr11:75967800-75968400	Enhancers	Placenta Amnion	Placenta Amnion
9	chr11:75967800-75968600	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr11:75967800-75968600	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr11:75967800-75968600	Enhancers	Fetal Muscle Leg	muscle
12	chr11:75967800-75968800	Enhancers	H1 Cell Line	embryonic stem cell
13	chr11:75967800-75968800	Enhancers	HUES6 Cell Line	embryonic stem cell
14	chr11:75967800-75968800	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr11:75968000-75968400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr11:75968000-75968600	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr11:75968000-75968800	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr11:75968200-75968400	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr11:75968200-75968400	Enhancers	Brain Inferior Temporal Lobe	brain
20	chr11:75968200-75968400	Bivalent Enhancer	HepG2	liver
21	chr11:75968200-75968400	Bivalent Enhancer	HSMMtube	muscle

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