Variant report
| Variant | rs55980983 |
|---|---|
| Chromosome Location | chr2:181910888-181910889 |
| allele | A/C |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:181901200-181912200 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 2 | chr2:181901600-181911200 | Weak transcription | GM12878-XiMat | blood |
| 3 | chr2:181902200-181926400 | Weak transcription | HSMM | muscle |
| 4 | chr2:181902800-181934200 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 5 | chr2:181903600-181918800 | Weak transcription | NHEK | skin |
| 6 | chr2:181903800-181917000 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 7 | chr2:181903800-181934600 | Weak transcription | NH-A | brain |
| 8 | chr2:181904200-181919200 | Weak transcription | Osteobl | bone |
| 9 | chr2:181904400-181915600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 10 | chr2:181904400-181934000 | Weak transcription | NHDF-Ad | bronchial |
| 11 | chr2:181904400-181945400 | Weak transcription | Left Ventricle | heart |
| 12 | chr2:181906400-181919400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 13 | chr2:181907600-181917000 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 14 | chr2:181907800-181911000 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 15 | chr2:181907800-181911000 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 16 | chr2:181908000-181911000 | Weak transcription | Primary hematopoietic stem cells | blood |
| 17 | chr2:181909400-181911400 | Enhancers | Brain Cingulate Gyrus | brain |
| 18 | chr2:181909400-181911800 | Enhancers | Primary T cells from cord blood | blood |
| 19 | chr2:181909800-181911200 | Enhancers | Brain Angular Gyrus | brain |
| 20 | chr2:181909800-181911400 | Enhancers | Brain Substantia Nigra | brain |
| 21 | chr2:181909800-181911800 | Enhancers | Brain Hippocampus Middle | brain |
| 22 | chr2:181910000-181911400 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 23 | chr2:181910000-181912600 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 24 | chr2:181910200-181911000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 25 | chr2:181910200-181911000 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 26 | chr2:181910200-181911000 | Weak transcription | Stomach Mucosa | stomach |
| 27 | chr2:181910200-181911200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 28 | chr2:181910200-181911400 | Enhancers | Primary T helper naive cells from peripheral blood | blood |
| 29 | chr2:181910200-181911800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 30 | chr2:181910400-181916800 | Weak transcription | Colon Smooth Muscle | Colon |
| 31 | chr2:181910600-181912400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 32 | chr2:181910800-181911000 | Enhancers | Fetal Lung | lung |
| 33 | chr2:181910800-181912200 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
