Variant report

Variant	rs559943342
Chromosome Location	chr7:137573698-137573699
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:137569917..137572586-chr7:137572838..137575553,3	K562	blood:
2	chr7:137285346..137287322-chr7:137572540..137575498,2	K562	blood:

Extended variants
information (count: 15 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:15 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022793	chr7:137187383-137619359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv831150	chr7:137500559-137652808	Enhancers Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
3	nsv518070	chr7:137534627-137808839	Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
4	esv3516936	chr7:137572262-137574860	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3477521	chr7:137572830-137573947	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3477518	chr7:137572873-137573927	Weak transcription Enhancers Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3477520	chr7:137572894-137573908	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3409156	chr7:137572921-137573923	Weak transcription Genic enhancers Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3516938	chr7:137572952-137573892	Genic enhancers Strong transcription Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3335685	chr7:137572969-137573849	Strong transcription Genic enhancers Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3516937	chr7:137573004-137573833	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv3477522	chr7:137573008-137573831	Strong transcription Weak transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	esv3516939	chr7:137573008-137573831	Strong transcription Weak transcription Genic enhancers Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	esv21119	chr7:137573105-137573771	Weak transcription Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv608470	chr7:137573187-137577761	Weak transcription Strong transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:137533800-137575400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:137555600-137583200	Strong transcription	Monocytes-CD14+_RO01746	blood
3	chr7:137557800-137583800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr7:137558400-137579200	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
5	chr7:137558800-137588400	Weak transcription	Stomach Mucosa	stomach
6	chr7:137559400-137575200	Strong transcription	HepG2	liver
7	chr7:137561000-137577000	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
8	chr7:137563400-137575200	Weak transcription	Psoas Muscle	Psoas
9	chr7:137564600-137575400	Strong transcription	Placenta Amnion	Placenta Amnion
10	chr7:137565200-137574200	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr7:137567200-137583800	Strong transcription	Liver	Liver
12	chr7:137567400-137580200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
13	chr7:137567400-137583400	Strong transcription	Primary monocytes fromperipheralblood	blood
14	chr7:137567400-137583800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
15	chr7:137567400-137584000	Strong transcription	Fetal Intestine Large	intestine
16	chr7:137567600-137573800	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
17	chr7:137568000-137574200	Strong transcription	Fetal Intestine Small	intestine
18	chr7:137568000-137584200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr7:137568600-137575200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr7:137568600-137584000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
21	chr7:137568800-137578800	Weak transcription	Fetal Kidney	kidney
22	chr7:137569600-137574200	Genic enhancers	Placenta	Placenta
23	chr7:137570200-137574400	Weak transcription	Dnd41	blood
24	chr7:137570200-137575200	Strong transcription	Muscle Satellite Cultured Cells	--
25	chr7:137570200-137575200	Weak transcription	NHDF-Ad	bronchial
26	chr7:137570200-137577800	Weak transcription	Small Intestine	intestine
27	chr7:137570200-137578600	Weak transcription	H9 Cell Line	embryonic stem cell
28	chr7:137570200-137578600	Weak transcription	Pancreatic Islets	Pancreatic Islet
29	chr7:137570200-137579800	Weak transcription	A549	lung
30	chr7:137570400-137578200	Weak transcription	Primary T helper cells PMA-I stimulated	--
31	chr7:137570400-137578400	Weak transcription	Primary neutrophils fromperipheralblood	blood
32	chr7:137570400-137578600	Weak transcription	Aorta	Aorta
33	chr7:137570400-137579200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
34	chr7:137570400-137584000	Weak transcription	Fetal Thymus	thymus
35	chr7:137570400-137585800	Weak transcription	Hela-S3	cervix
36	chr7:137570600-137573800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
37	chr7:137570600-137573800	Weak transcription	Primary T cells from cord blood	blood
38	chr7:137570600-137575200	Weak transcription	Left Ventricle	heart
39	chr7:137570600-137575200	Weak transcription	Rectal Mucosa Donor 29	rectum
40	chr7:137570600-137575400	Weak transcription	Primary T cells fromperipheralblood	blood
41	chr7:137570600-137575400	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr7:137570600-137578000	Weak transcription	HUVEC	blood vessel
43	chr7:137570600-137578600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
44	chr7:137570600-137579200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
45	chr7:137570600-137580600	Weak transcription	Esophagus	oesophagus
46	chr7:137570600-137580600	Weak transcription	Gastric	stomach
47	chr7:137570600-137583800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
48	chr7:137570600-137585400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
49	chr7:137570800-137574000	Weak transcription	Fetal Lung	lung
50	chr7:137570800-137575800	Weak transcription	Rectal Mucosa Donor 31	rectum

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