The 2.0 version of rSNPBase

Variant report

Variant rs55998444
Chromosome Location chr2:128119846-128119847
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:128077200-128122800 Weak transcription Aorta Aorta
2 chr2:128092600-128122000 Weak transcription Pancreas Pancrea
3 chr2:128093200-128122800 Weak transcription Fetal Kidney kidney
4 chr2:128095600-128122000 Weak transcription Brain Angular Gyrus brain
5 chr2:128096400-128122200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr2:128102600-128122400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:128105600-128127400 Weak transcription Primary hematopoietic stem cells blood
8 chr2:128107000-128122800 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr2:128107200-128122800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
10 chr2:128107800-128140200 Weak transcription Gastric stomach
11 chr2:128109600-128124600 Weak transcription Stomach Mucosa stomach
12 chr2:128109800-128121000 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr2:128109800-128121400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr2:128109800-128121400 Weak transcription Left Ventricle heart
15 chr2:128109800-128121400 Weak transcription Ovary ovary
16 chr2:128109800-128121400 Weak transcription Right Atrium heart
17 chr2:128109800-128123000 Weak transcription Right Ventricle heart
18 chr2:128109800-128134000 Weak transcription Lung lung
19 chr2:128110200-128127800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
20 chr2:128112200-128120600 Weak transcription Adipose Nuclei Adipose
21 chr2:128112200-128126400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:128112400-128121400 Weak transcription Primary monocytes fromperipheralblood blood
23 chr2:128112600-128122000 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr2:128112600-128127200 Weak transcription Primary B cells from cord blood blood
25 chr2:128113000-128120600 Weak transcription Brain Hippocampus Middle brain
26 chr2:128115200-128120200 Weak transcription Fetal Lung lung
27 chr2:128116000-128121400 Enhancers A549 lung
28 chr2:128116200-128122400 Weak transcription Brain Germinal Matrix brain
29 chr2:128116800-128127600 Weak transcription Thymus Thymus
30 chr2:128117200-128122800 Weak transcription H1 Cell Line embryonic stem cell
31 chr2:128117200-128123400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr2:128117400-128121600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr2:128117400-128122800 Weak transcription Small Intestine intestine
34 chr2:128117400-128123000 Weak transcription Psoas Muscle Psoas
35 chr2:128117600-128121200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr2:128117600-128121400 Weak transcription Fetal Heart heart
37 chr2:128117600-128125800 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr2:128117800-128121400 Weak transcription Spleen Spleen
39 chr2:128117800-128122800 Weak transcription ES-WA7 Cell Line embryonic stem cell
40 chr2:128118000-128120200 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr2:128118000-128121600 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr2:128118000-128123000 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr2:128118400-128120800 Enhancers Liver Liver
44 chr2:128118600-128122000 Weak transcription HepG2 liver
45 chr2:128119200-128120600 Enhancers Primary T killer memory cells from peripheral blood blood
46 chr2:128119200-128120800 Enhancers Pancreatic Islets Pancreatic Islet
47 chr2:128119200-128122200 Enhancers Muscle Satellite Cultured Cells --
48 chr2:128119400-128120000 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr2:128119400-128120800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr2:128119400-128121200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015