Variant report

Variant rs56002706
Chromosome Location chr17:44000505-44000506
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:22 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:43994800-44001400 Weak transcription Fetal Brain Female brain
2 chr17:43995000-44000600 Weak transcription Right Atrium heart
3 chr17:43996600-44002800 Enhancers Brain Substantia Nigra brain
4 chr17:43996600-44003000 Enhancers Brain Angular Gyrus brain
5 chr17:43996800-44002600 Enhancers Brain Cingulate Gyrus brain
6 chr17:43997600-44002800 Enhancers Skeletal Muscle Male skeletal muscle
7 chr17:43998000-44001600 Weak transcription Spleen Spleen
8 chr17:43998000-44002600 Enhancers Skeletal Muscle Female skeletal muscle
9 chr17:43998200-44004000 Weak transcription Brain Germinal Matrix brain
10 chr17:43998600-44003200 Enhancers Brain Hippocampus Middle brain
11 chr17:43999400-44001800 Enhancers Psoas Muscle Psoas
12 chr17:43999600-44002600 Enhancers Brain Anterior Caudate brain
13 chr17:43999800-44002800 Enhancers Brain Inferior Temporal Lobe brain
14 chr17:44000000-44000800 Enhancers HepG2 liver
15 chr17:44000000-44002800 Enhancers Fetal Adrenal Gland Adrenal Gland
16 chr17:44000200-44001000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr17:44000200-44001800 Enhancers Cortex derived primary cultured neurospheres brain
18 chr17:44000200-44002000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr17:44000400-44000600 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
20 chr17:44000400-44001200 Genic enhancers Liver Liver
21 chr17:44000400-44002800 Enhancers Adipose Nuclei Adipose
22 chr17:44000400-44007800 Weak transcription K562 blood

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