Variant report

Variant	rs560035102
Chromosome Location	chr8:62037816-62037817
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948922	chr8:61818964-62475097	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	esv2761428	chr8:62035527-62045992	Bivalent Enhancer Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv465698	chr8:62036793-62179465	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv611426	chr8:62036793-62179465	Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:62034400-62051400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr8:62036400-62038000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:62037000-62039600	Flanking Active TSS	GM12878-XiMat	blood
4	chr8:62037200-62038000	Enhancers	Primary hematopoietic stem cells short term culture	blood
5	chr8:62037200-62039200	Enhancers	Primary B cells from peripheral blood	blood
6	chr8:62037400-62038200	Bivalent Enhancer	Primary Natural Killer cells fromperipheralblood	blood
7	chr8:62037400-62038200	Enhancers	Monocytes-CD14+_RO01746	blood
8	chr8:62037600-62038200	Enhancers	Primary monocytes fromperipheralblood	blood
9	chr8:62037800-62038000	Bivalent Enhancer	Primary T cells from cord blood	blood
10	chr8:62037800-62038200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr8:62037800-62038400	Flanking Active TSS	Primary B cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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