The 2.0 version of rSNPBase

Variant report

Variant rs560152189
Chromosome Location chr6:101060554-101060555
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:101009000-101065600 Weak transcription NHEK skin
2 chr6:101011000-101080800 Weak transcription HepG2 liver
3 chr6:101016400-101065800 Weak transcription Placenta Amnion Placenta Amnion
4 chr6:101017200-101069400 Weak transcription Fetal Lung lung
5 chr6:101017800-101069800 Weak transcription Lung lung
6 chr6:101020400-101066200 Weak transcription Stomach Smooth Muscle stomach
7 chr6:101025800-101099800 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr6:101027800-101070000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr6:101028000-101068800 Weak transcription Psoas Muscle Psoas
10 chr6:101030200-101070000 Weak transcription Aorta Aorta
11 chr6:101032400-101102000 Weak transcription Thymus Thymus
12 chr6:101032400-101104400 Weak transcription Skeletal Muscle Male skeletal muscle
13 chr6:101032600-101102000 Weak transcription Brain Hippocampus Middle brain
14 chr6:101032600-101110400 Weak transcription Colon Smooth Muscle Colon
15 chr6:101032800-101065600 Weak transcription Colonic Mucosa Colon
16 chr6:101033800-101065400 Weak transcription Hela-S3 cervix
17 chr6:101034000-101085000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr6:101034400-101066200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
19 chr6:101034400-101084200 Weak transcription Fetal Muscle Leg muscle
20 chr6:101034400-101092400 Weak transcription Pancreas Pancrea
21 chr6:101035400-101065600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr6:101035800-101070000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr6:101036000-101064600 Weak transcription Fetal Adrenal Gland Adrenal Gland
24 chr6:101036000-101075200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr6:101036000-101084800 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr6:101036200-101073000 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr6:101036200-101084000 Weak transcription iPS-18 Cell Line embryonic stem cell
28 chr6:101037400-101110600 Weak transcription K562 blood
29 chr6:101037600-101071200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr6:101037600-101072200 Weak transcription Adipose Nuclei Adipose
31 chr6:101037800-101107200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr6:101038000-101073200 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr6:101038000-101084200 Weak transcription Fetal Thymus thymus
34 chr6:101038600-101065400 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr6:101039200-101071200 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr6:101041800-101065600 Weak transcription HSMMtube muscle
37 chr6:101043800-101070200 Weak transcription Spleen Spleen
38 chr6:101048600-101065600 Weak transcription Primary hematopoietic stem cells blood
39 chr6:101049000-101065400 Weak transcription Ovary ovary
40 chr6:101049000-101066200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr6:101049000-101066200 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr6:101049200-101065600 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr6:101049200-101066000 Weak transcription Left Ventricle heart
44 chr6:101049400-101065600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr6:101049400-101069400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr6:101049400-101069400 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr6:101049400-101069400 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr6:101049400-101070800 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr6:101049600-101065800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr6:101049600-101070000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015