Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:77726824..77729314-chr14:78083022..78085300,2	K562	blood:

Variant related genes	Relation type
ENSG00000100596	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10130726	1.00[AFR][1000 genomes]
rs17105658	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28488389	1.00[AFR][1000 genomes]
rs28988622	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs45561437	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55673423	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs55922804	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72679184	0.91[ASN][1000 genomes]
rs72679190	0.93[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs72679191	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs72681205	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72681209	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72681214	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs72681222	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs8177546	0.82[ASN][1000 genomes]
rs8177560	0.82[ASN][1000 genomes]
rs8177565	0.82[ASN][1000 genomes]
rs8177567	0.82[ASN][1000 genomes]
rs8177568	0.82[ASN][1000 genomes]
rs8177571	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv431017	chr14:76938089-77854647	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	107 gene(s)	inside rSNPs	diseases
2	nsv1361	chr14:77707417-77753024	Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Enhancers Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	12 gene(s)	inside rSNPs	diseases
3	nsv902104	chr14:77720741-77756321	Weak transcription Flanking Bivalent TSS/Enh Genic enhancers Strong transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:77709800-77729600	Weak transcription	Fetal Brain Male	brain
2	chr14:77711200-77731000	Weak transcription	Spleen	Spleen
3	chr14:77723000-77734000	Weak transcription	Gastric	stomach
4	chr14:77725000-77730400	Weak transcription	Fetal Brain Female	brain
5	chr14:77727200-77732000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr14:77727400-77731800	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr14:77727800-77731400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
8	chr14:77728000-77731200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr14:77728000-77731400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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