Variant report

Variant rs56099296
Chromosome Location chr4:187643686-187643687
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:187634800-187644200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr4:187635400-187644200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr4:187635800-187643800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr4:187638200-187644200 Weak transcription Pancreas Pancrea
5 chr4:187641800-187644000 Weak transcription H9 Cell Line embryonic stem cell
6 chr4:187642000-187644000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr4:187642000-187644200 Weak transcription Lung lung
8 chr4:187642000-187646800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr4:187642600-187643800 Transcr. at gene 5' and 3' NHEK skin
10 chr4:187642600-187646200 Active TSS H1 Cell Line embryonic stem cell
11 chr4:187642600-187649200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr4:187642800-187644400 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr4:187642800-187649000 Active TSS ES-I3 Cell Line embryonic stem cell
14 chr4:187643000-187646200 Active TSS HUES48 Cell Line embryonic stem cell
15 chr4:187643000-187646400 Active TSS iPS-15b Cell Line embryonic stem cell
16 chr4:187643000-187648600 Active TSS HUES64 Cell Line embryonic stem cell
17 chr4:187643000-187648600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
18 chr4:187643200-187643800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr4:187643200-187644000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
20 chr4:187643200-187644000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr4:187643200-187644000 Flanking Active TSS NH-A brain
22 chr4:187643200-187648600 Active TSS Right Ventricle heart
23 chr4:187643200-187648600 Active TSS HSMM muscle
24 chr4:187643200-187648600 Active TSS NHLF lung
25 chr4:187643200-187648800 Active TSS Osteobl bone
26 chr4:187643200-187649000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr4:187643200-187649000 Active TSS Breast Myoepithelial Primary Cells Breast
28 chr4:187643200-187649000 Active TSS HMEC breast
29 chr4:187643200-187649200 Active TSS Fetal Intestine Small intestine
30 chr4:187643200-187649800 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr4:187643400-187643800 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr4:187643400-187643800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
33 chr4:187643400-187643800 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr4:187643400-187643800 Bivalent Enhancer Adipose Nuclei Adipose
35 chr4:187643400-187643800 Flanking Active TSS Fetal Intestine Large intestine
36 chr4:187643400-187644000 Flanking Active TSS Muscle Satellite Cultured Cells --
37 chr4:187643400-187644000 Weak transcription Aorta Aorta
38 chr4:187643400-187644200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr4:187643400-187644200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
40 chr4:187643400-187644200 Active TSS Fetal Muscle Leg muscle
41 chr4:187643400-187644200 Weak transcription Left Ventricle heart
42 chr4:187643400-187645400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chr4:187643400-187646000 Active TSS K562 blood
44 chr4:187643400-187646200 Active TSS iPS-20b Cell Line embryonic stem cell
45 chr4:187643400-187648600 Active TSS Pancreatic Islets Pancreatic Islet
46 chr4:187643400-187649000 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr4:187643400-187649000 Active TSS NHDF-Ad bronchial
48 chr4:187643400-187650000 Active TSS Duodenum Mucosa Duodenum
49 chr4:187643600-187643800 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
50 chr4:187643600-187643800 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain

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