The 2.0 version of rSNPBase

Variant report

Variant rs56104629
Chromosome Location chr7:101893646-101893647
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:101846000-101904200 Weak transcription Stomach Mucosa stomach
2 chr7:101852800-101897000 Weak transcription NHEK skin
3 chr7:101854400-101894800 Weak transcription K562 blood
4 chr7:101858400-101897600 Weak transcription Psoas Muscle Psoas
5 chr7:101865000-101904200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr7:101866000-101896400 Weak transcription Muscle Satellite Cultured Cells --
7 chr7:101866800-101907600 Weak transcription NH-A brain
8 chr7:101867400-101898000 Strong transcription Primary monocytes fromperipheralblood blood
9 chr7:101867400-101898000 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr7:101867800-101900400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr7:101868000-101894000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr7:101870000-101894200 Strong transcription Fetal Thymus thymus
13 chr7:101870200-101898000 Strong transcription Primary neutrophils fromperipheralblood blood
14 chr7:101870400-101895800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr7:101872400-101898800 Weak transcription Brain Angular Gyrus brain
16 chr7:101872400-101904000 Weak transcription Brain Cingulate Gyrus brain
17 chr7:101873600-101894600 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr7:101873600-101904000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr7:101875600-101894200 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr7:101875600-101898000 Strong transcription Dnd41 blood
21 chr7:101877600-101895400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr7:101878000-101894400 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr7:101878600-101895800 Weak transcription HSMMtube muscle
24 chr7:101878600-101896000 Weak transcription HSMM muscle
25 chr7:101878600-101896200 Weak transcription Brain Anterior Caudate brain
26 chr7:101880400-101898400 Strong transcription Fetal Stomach stomach
27 chr7:101881800-101893800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr7:101882800-101894800 Weak transcription H9 Cell Line embryonic stem cell
29 chr7:101883000-101896600 Weak transcription NHLF lung
30 chr7:101883000-101904000 Weak transcription Fetal Brain Female brain
31 chr7:101883400-101895000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr7:101884200-101904000 Weak transcription Colon Smooth Muscle Colon
33 chr7:101884400-101895200 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr7:101885200-101894400 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr7:101885200-101898400 Strong transcription Fetal Intestine Small intestine
36 chr7:101885200-101901800 Weak transcription A549 lung
37 chr7:101885400-101894400 Strong transcription Fetal Intestine Large intestine
38 chr7:101885600-101899400 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr7:101886200-101894600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr7:101886200-101904200 Weak transcription Brain Substantia Nigra brain
41 chr7:101886200-101906200 Weak transcription Primary B cells from peripheral blood blood
42 chr7:101886400-101894600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr7:101886400-101895800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr7:101886400-101897600 Weak transcription Rectal Smooth Muscle rectum
45 chr7:101886400-101899200 Weak transcription Duodenum Mucosa Duodenum
46 chr7:101886800-101894400 Weak transcription Primary T cells fromperipheralblood blood
47 chr7:101886800-101895200 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr7:101886800-101899200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr7:101887200-101894800 Strong transcription Primary T cells from cord blood blood
50 chr7:101887400-101893800 Strong transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015