The 2.0 version of rSNPBase

Variant report

Variant rs56139168
Chromosome Location chr4:56273287-56273288
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56264800-56282200 Weak transcription Placenta Amnion Placenta Amnion
2 chr4:56264800-56292200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr4:56265400-56273400 Weak transcription Aorta Aorta
4 chr4:56265600-56273800 Weak transcription Stomach Mucosa stomach
5 chr4:56265600-56275600 Weak transcription Skeletal Muscle Male skeletal muscle
6 chr4:56265600-56281600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr4:56265600-56283800 Weak transcription Fetal Brain Male brain
8 chr4:56265600-56286000 Weak transcription Colonic Mucosa Colon
9 chr4:56265600-56289800 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr4:56265600-56319800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr4:56265800-56274400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr4:56265800-56275200 Weak transcription Fetal Heart heart
13 chr4:56265800-56281200 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr4:56266000-56283200 Weak transcription Rectal Smooth Muscle rectum
15 chr4:56266200-56275600 Weak transcription Right Ventricle heart
16 chr4:56266600-56274200 Strong transcription Primary hematopoietic stem cells short term culture blood
17 chr4:56267400-56274200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr4:56267400-56275200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr4:56267400-56280800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr4:56267400-56282800 Weak transcription Small Intestine intestine
21 chr4:56267400-56283200 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr4:56267600-56275800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr4:56267600-56280800 Weak transcription A549 lung
24 chr4:56267800-56273400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr4:56268800-56326000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr4:56269000-56273600 Strong transcription Primary B cells from peripheral blood blood
27 chr4:56269000-56274400 Strong transcription HSMM muscle
28 chr4:56269000-56311400 Strong transcription Monocytes-CD14+_RO01746 blood
29 chr4:56269200-56273400 Strong transcription Osteobl bone
30 chr4:56269200-56273800 Strong transcription Rectal Mucosa Donor 29 rectum
31 chr4:56269200-56274000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:56269200-56274000 Strong transcription NH-A brain
33 chr4:56269200-56274000 Strong transcription NHDF-Ad bronchial
34 chr4:56269200-56274200 Strong transcription iPS-18 Cell Line embryonic stem cell
35 chr4:56269200-56274200 Strong transcription iPS-20b Cell Line embryonic stem cell
36 chr4:56269200-56274200 Strong transcription Duodenum Mucosa Duodenum
37 chr4:56269200-56274200 Strong transcription Fetal Intestine Large intestine
38 chr4:56269200-56274600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
39 chr4:56269200-56275000 Strong transcription Fetal Thymus thymus
40 chr4:56269400-56273400 Strong transcription HUES6 Cell Line embryonic stem cell
41 chr4:56269400-56273400 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr4:56269400-56273400 Strong transcription HMEC breast
43 chr4:56269400-56273600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr4:56269400-56273800 Strong transcription Placenta Placenta
45 chr4:56269400-56274600 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr4:56269400-56274800 Strong transcription Primary monocytes fromperipheralblood blood
47 chr4:56269600-56273400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr4:56269800-56273400 Strong transcription Adipose Nuclei Adipose
49 chr4:56269800-56273600 Strong transcription Primary neutrophils fromperipheralblood blood
50 chr4:56269800-56274000 Strong transcription H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015