Variant report

Variant	rs561823936
Chromosome Location	chr6:74932621-74932622
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3394316	chr6:74630005-74935625	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv603733	chr6:74666559-74944460	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv3327625	chr6:74716120-74971605	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	nsv886162	chr6:74903797-75006170	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	esv3370657	chr6:74930732-74935030	Enhancers Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	n/a
6	esv3509793	chr6:74932007-74934080	Enhancers Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
7	esv3474101	chr6:74932586-74933179	Enhancers Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	n/a
8	esv3509797	chr6:74932616-74933157	Enhancers Active TSS Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
9	esv3509795	chr6:74932618-74933188	Enhancers Flanking Active TSS Active TSS	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:74932200-74933200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr6:74932200-74933400	Enhancers	iPS-15b Cell Line	embryonic stem cell
3	chr6:74932200-74933600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr6:74932400-74932800	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr6:74932400-74933000	Enhancers	H1 Cell Line	embryonic stem cell
6	chr6:74932400-74933000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr6:74932400-74933000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr6:74932400-74933000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr6:74932400-74933000	Active TSS	iPS-20b Cell Line	embryonic stem cell
10	chr6:74932400-74933200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr6:74932600-74933000	Enhancers	HUES64 Cell Line	embryonic stem cell
12	chr6:74932600-74933000	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr6:74932600-74933200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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