Variant report

Variant	rs56203918
Chromosome Location	chr14:70216451-70216452
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10134553	1.00[ASN][1000 genomes]
rs10151946	1.00[EUR][1000 genomes]
rs10450925	1.00[ASN][1000 genomes]
rs12896497	1.00[ASN][1000 genomes]
rs17107278	1.00[ASN][1000 genomes]
rs17107328	1.00[EUR][1000 genomes]
rs2332166	0.81[AMR][1000 genomes]
rs28607349	1.00[ASN][1000 genomes]
rs57714406	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58712157	1.00[EUR][1000 genomes]
rs73283334	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285246	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285258	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285283	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73285287	1.00[EUR][1000 genomes]
rs73286913	1.00[EUR][1000 genomes]
rs8014019	1.00[ASN][1000 genomes]
rs9323529	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv456336	chr14:70081956-70574149	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Strong transcription Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases
2	nsv565007	chr14:70081956-70574149	Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	75 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70212800-70216600	Enhancers	HepG2	liver
2	chr14:70213200-70218000	Enhancers	Fetal Intestine Small	intestine
3	chr14:70213800-70216600	Weak transcription	K562	blood
4	chr14:70215000-70218000	Enhancers	Fetal Intestine Large	intestine
5	chr14:70216000-70217600	Enhancers	Liver	Liver
6	chr14:70216000-70218000	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr14:70216400-70217600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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