Variant report

Variant rs56234850
Chromosome Location chr17:44060248-44060249
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:44049600-44060600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr17:44051200-44076800 Strong transcription Fetal Brain Female brain
3 chr17:44051400-44081400 Weak transcription Right Atrium heart
4 chr17:44052000-44102600 Weak transcription Right Ventricle heart
5 chr17:44052400-44069800 Weak transcription Fetal Brain Male brain
6 chr17:44054800-44072800 Weak transcription Psoas Muscle Psoas
7 chr17:44055800-44061200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr17:44055800-44061400 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr17:44055800-44061800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr17:44056000-44060600 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr17:44056200-44063400 Strong transcription Brain Inferior Temporal Lobe brain
12 chr17:44056800-44062000 Strong transcription Brain Hippocampus Middle brain
13 chr17:44057000-44066200 Strong transcription Brain Germinal Matrix brain
14 chr17:44059000-44061400 Weak transcription Brain Anterior Caudate brain
15 chr17:44059600-44062000 Strong transcription Cortex derived primary cultured neurospheres brain
16 chr17:44059800-44061600 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr17:44059800-44062800 Strong transcription Brain Angular Gyrus brain
18 chr17:44060000-44062000 Strong transcription Brain Cingulate Gyrus brain
19 chr17:44060200-44060600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
20 chr17:44060200-44060800 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
21 chr17:44060200-44061800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr17:44060200-44062200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
23 chr17:44060200-44062200 Strong transcription Brain Substantia Nigra brain
24 chr17:44060200-44072400 Weak transcription Adipose Nuclei Adipose

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