Variant report

Variant	rs562618876
Chromosome Location	chr14:32929600-32929601
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758352	chr14:32858480-33016442	Enhancers Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	esv2759978	chr14:32858480-33016442	Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv901595	chr14:32928634-32961434	Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:32920800-32930200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr14:32923800-32929600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr14:32923800-32929600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr14:32923800-32936400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr14:32926800-32936800	Weak transcription	Brain Cingulate Gyrus	brain
6	chr14:32927000-32929600	Weak transcription	Aorta	Aorta
7	chr14:32927200-32929800	Weak transcription	Stomach Smooth Muscle	stomach
8	chr14:32928400-32929600	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr14:32928600-32929600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr14:32929400-32930800	Enhancers	Fetal Heart	heart
11	chr14:32929600-32929800	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr14:32929600-32930000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr14:32929600-32930600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr14:32929600-32930600	Strong transcription	Aorta	Aorta
15	chr14:32929600-32930600	Enhancers	Placenta	Placenta
16	chr14:32929600-32930600	Enhancers	Left Ventricle	heart
17	chr14:32929600-32930600	Enhancers	Right Ventricle	heart
18	chr14:32929600-32931000	Enhancers	Placenta Amnion	Placenta Amnion

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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