Variant report

Variant	rs56298450
Chromosome Location	chr2:181942795-181942796
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:181941490..181943748-chr2:181947073..181949611,2	K562	blood:

rs_ID	r²[population]
rs10173932	1.00[AMR][1000 genomes]
rs10186141	1.00[AMR][1000 genomes]
rs10200804	1.00[AMR][1000 genomes]
rs55660649	0.86[EUR][1000 genomes]
rs55699373	1.00[EUR][1000 genomes]
rs55854201	1.00[EUR][1000 genomes]
rs55934533	1.00[EUR][1000 genomes]
rs56066931	1.00[EUR][1000 genomes]
rs56184714	1.00[EUR][1000 genomes]
rs56208112	1.00[EUR][1000 genomes]
rs56227816	0.86[EUR][1000 genomes]
rs56252601	0.86[EUR][1000 genomes]
rs56329092	1.00[EUR][1000 genomes]
rs56347806	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6741600	0.93[EUR][1000 genomes]
rs6742878	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6745557	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6755739	0.86[EUR][1000 genomes]
rs73976824	1.00[EUR][1000 genomes]
rs73976835	0.87[EUR][1000 genomes]
rs7578322	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:181904400-181945400	Weak transcription	Left Ventricle	heart
2	chr2:181920800-181949800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr2:181928600-181943000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:181934800-181947800	Weak transcription	Ovary	ovary
5	chr2:181935000-181948000	Weak transcription	Small Intestine	intestine
6	chr2:181935600-181943600	Weak transcription	Fetal Heart	heart
7	chr2:181935600-181946200	Weak transcription	Primary hematopoietic stem cells	blood
8	chr2:181937400-181945600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr2:181937800-181949600	Weak transcription	HSMMtube	muscle
10	chr2:181938400-181954800	Weak transcription	Psoas Muscle	Psoas
11	chr2:181939400-181943600	Weak transcription	HSMM	muscle
12	chr2:181939400-181948200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr2:181939400-181953000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr2:181940400-181946200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr2:181941200-181942800	Weak transcription	Osteobl	bone
16	chr2:181941200-181948800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr2:181942000-181943200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr2:181942200-181942800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
19	chr2:181942400-181943000	Enhancers	Primary neutrophils fromperipheralblood	blood
20	chr2:181942600-181946000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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