The 2.0 version of rSNPBase

Variant report

Variant rs563227530
Chromosome Location chr8:100214314-100214315
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:100163400-100214400 Weak transcription Rectal Mucosa Donor 29 rectum
2 chr8:100163400-100224800 Weak transcription Duodenum Mucosa Duodenum
3 chr8:100163400-100225000 Weak transcription Fetal Thymus thymus
4 chr8:100163400-100226800 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr8:100163400-100226800 Weak transcription Fetal Muscle Trunk muscle
6 chr8:100163400-100230600 Weak transcription Right Ventricle heart
7 chr8:100163600-100214400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr8:100164000-100225600 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr8:100164000-100229600 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr8:100164200-100245000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr8:100164800-100214400 Weak transcription Liver Liver
12 chr8:100171400-100214400 Weak transcription Primary T cells fromperipheralblood blood
13 chr8:100175400-100222800 Weak transcription Fetal Stomach stomach
14 chr8:100176200-100222600 Weak transcription Fetal Intestine Large intestine
15 chr8:100178800-100245000 Weak transcription Breast Myoepithelial Primary Cells Breast
16 chr8:100178800-100245000 Weak transcription Fetal Intestine Small intestine
17 chr8:100179200-100217000 Weak transcription Adipose Nuclei Adipose
18 chr8:100179200-100223000 Weak transcription Fetal Muscle Leg muscle
19 chr8:100179200-100229600 Weak transcription Fetal Lung lung
20 chr8:100179400-100216800 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr8:100188000-100230800 Weak transcription Left Ventricle heart
22 chr8:100198400-100220000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr8:100198400-100245800 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr8:100201400-100245200 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr8:100202200-100243600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr8:100202600-100215600 Weak transcription K562 blood
27 chr8:100203000-100220800 Weak transcription HepG2 liver
28 chr8:100203000-100222600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr8:100203000-100230000 Weak transcription HSMMtube muscle
30 chr8:100203000-100236200 Weak transcription HSMM muscle
31 chr8:100203400-100215400 Weak transcription A549 lung
32 chr8:100203600-100214400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr8:100203600-100216400 Weak transcription Osteobl bone
34 chr8:100203600-100217200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr8:100203600-100229400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr8:100203600-100229800 Weak transcription NH-A brain
37 chr8:100203600-100230200 Weak transcription Ovary ovary
38 chr8:100203800-100215400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr8:100203800-100219200 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr8:100203800-100245600 Weak transcription Primary neutrophils fromperipheralblood blood
41 chr8:100204200-100227800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
42 chr8:100204200-100229400 Weak transcription NHDF-Ad bronchial
43 chr8:100204200-100248200 Weak transcription Esophagus oesophagus
44 chr8:100204400-100216200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr8:100205000-100216400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr8:100205200-100241600 Weak transcription Skeletal Muscle Female skeletal muscle
47 chr8:100205600-100230400 Weak transcription Stomach Smooth Muscle stomach
48 chr8:100206800-100215200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr8:100207000-100214400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr8:100207000-100245600 Weak transcription Primary T regulatory cells fromperipheralblood blood

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Last update: Aug 31, 2015