The 2.0 version of rSNPBase

Variant report

Variant rs56331162
Chromosome Location chr6:64428540-64428541
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:64415400-64431200 Weak transcription Esophagus oesophagus
2 chr6:64422600-64441800 Weak transcription HSMM muscle
3 chr6:64423000-64428800 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr6:64423400-64431200 Weak transcription Gastric stomach
5 chr6:64423400-64433800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:64423400-64435000 Weak transcription Fetal Intestine Small intestine
7 chr6:64423400-64441200 Weak transcription HUVEC blood vessel
8 chr6:64423400-64441800 Weak transcription Pancreas Pancrea
9 chr6:64423600-64428600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr6:64423600-64429000 Weak transcription Muscle Satellite Cultured Cells --
11 chr6:64423600-64430800 Weak transcription Hela-S3 cervix
12 chr6:64423600-64431200 Weak transcription Stomach Mucosa stomach
13 chr6:64423600-64432400 Weak transcription H9 Cell Line embryonic stem cell
14 chr6:64423600-64433800 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr6:64423600-64434400 Weak transcription A549 lung
16 chr6:64423600-64441600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
17 chr6:64423600-64441800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:64423600-64441800 Weak transcription NHDF-Ad bronchial
19 chr6:64423600-64444400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr6:64423800-64429000 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr6:64423800-64433800 Weak transcription Liver Liver
22 chr6:64423800-64434000 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr6:64423800-64435000 Weak transcription Duodenum Mucosa Duodenum
24 chr6:64424200-64428600 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr6:64424200-64428800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr6:64424200-64430400 Weak transcription Rectal Mucosa Donor 29 rectum
27 chr6:64424200-64450400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr6:64424600-64431600 Weak transcription Primary hematopoietic stem cells blood
29 chr6:64425200-64441600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr6:64426400-64434000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr6:64426400-64440800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr6:64426600-64428600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:64426600-64435400 Weak transcription Primary T cells from cord blood blood
34 chr6:64426600-64441000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr6:64426800-64433800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr6:64426800-64433800 Weak transcription Fetal Intestine Large intestine
37 chr6:64427000-64428600 Weak transcription Placenta Placenta
38 chr6:64427400-64429000 Weak transcription Fetal Thymus thymus
39 chr6:64428400-64428600 Enhancers NHLF lung
40 chr6:64428400-64429600 Enhancers HepG2 liver

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Last update: Aug 31, 2015