The 2.0 version of rSNPBase

Variant report

Variant rs563431681
Chromosome Location chr5:118277695-118277696
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118225400-118300400 Weak transcription Primary B cells from cord blood blood
2 chr5:118233800-118289200 Weak transcription Psoas Muscle Psoas
3 chr5:118244000-118279600 Weak transcription Liver Liver
4 chr5:118244000-118287400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr5:118250400-118289400 Weak transcription Primary B cells from peripheral blood blood
6 chr5:118252000-118279000 Weak transcription Left Ventricle heart
7 chr5:118253200-118280200 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr5:118253400-118279200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr5:118254000-118279800 Weak transcription Pancreas Pancrea
10 chr5:118256000-118277800 Weak transcription Fetal Intestine Small intestine
11 chr5:118257400-118285600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr5:118257600-118279800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr5:118258000-118280400 Weak transcription Rectal Smooth Muscle rectum
14 chr5:118259600-118286800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr5:118259600-118305000 Weak transcription Stomach Smooth Muscle stomach
16 chr5:118260600-118289400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr5:118262600-118282800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr5:118263000-118306000 Weak transcription Primary T cells from cord blood blood
19 chr5:118263400-118304000 Weak transcription Primary T helper naive cells from peripheral blood blood
20 chr5:118268400-118286800 Weak transcription iPS-20b Cell Line embryonic stem cell
21 chr5:118269400-118277800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr5:118269600-118286800 Weak transcription Adipose Nuclei Adipose
23 chr5:118270400-118291800 Weak transcription Fetal Intestine Large intestine
24 chr5:118271200-118277800 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr5:118271600-118277800 Weak transcription HUES64 Cell Line embryonic stem cell
26 chr5:118271600-118288400 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr5:118271800-118278400 Weak transcription H1 Cell Line embryonic stem cell
28 chr5:118271800-118286600 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr5:118272200-118286000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr5:118273600-118295400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr5:118274000-118280200 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr5:118274000-118288000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr5:118274400-118281800 Weak transcription Primary T cells fromperipheralblood blood
34 chr5:118276000-118278200 Weak transcription Fetal Muscle Leg muscle
35 chr5:118276200-118281200 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr5:118276800-118277800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr5:118277400-118279600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr5:118277400-118279800 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr5:118277600-118278600 Weak transcription HSMMtube muscle

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Last update: Aug 31, 2015