The 2.0 version of rSNPBase

Variant report

Variant rs56356278
Chromosome Location chr11:46859787-46859788
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46848400-46863800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr11:46848400-46866200 Weak transcription Placenta Placenta
3 chr11:46848800-46862200 Weak transcription Fetal Muscle Trunk muscle
4 chr11:46848800-46865800 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr11:46849000-46865200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr11:46849000-46865200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr11:46849000-46865800 Weak transcription Primary hematopoietic stem cells blood
8 chr11:46849000-46865800 Weak transcription Thymus Thymus
9 chr11:46849000-46866200 Weak transcription Primary B cells from cord blood blood
10 chr11:46849000-46866200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr11:46849000-46867000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr11:46849200-46859800 Weak transcription Primary T cells fromperipheralblood blood
13 chr11:46849200-46860000 Weak transcription Ovary ovary
14 chr11:46849200-46860800 Weak transcription Primary hematopoietic stem cells short term culture blood
15 chr11:46849200-46861000 Weak transcription Fetal Thymus thymus
16 chr11:46849200-46863600 Weak transcription Fetal Muscle Leg muscle
17 chr11:46849200-46864400 Weak transcription Fetal Stomach stomach
18 chr11:46849200-46866000 Weak transcription NH-A brain
19 chr11:46849200-46866200 Weak transcription Brain Germinal Matrix brain
20 chr11:46849200-46866600 Weak transcription Psoas Muscle Psoas
21 chr11:46849600-46860800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr11:46849600-46866000 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr11:46849600-46866200 Weak transcription HSMM muscle
24 chr11:46849600-46866600 Weak transcription Brain Angular Gyrus brain
25 chr11:46849800-46863000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr11:46850000-46863600 Weak transcription HUVEC blood vessel
27 chr11:46850000-46866000 Weak transcription NHLF lung
28 chr11:46850000-46866600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr11:46850200-46862600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
30 chr11:46850200-46864000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr11:46850200-46864800 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr11:46850200-46865800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr11:46850400-46861000 Weak transcription NHDF-Ad bronchial
34 chr11:46850400-46866000 Weak transcription Muscle Satellite Cultured Cells --
35 chr11:46850400-46866400 Weak transcription Osteobl bone
36 chr11:46851600-46860800 Weak transcription Fetal Heart heart
37 chr11:46853200-46863600 Weak transcription HepG2 liver
38 chr11:46854600-46860800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr11:46854800-46860800 Weak transcription Dnd41 blood
40 chr11:46854800-46860800 Weak transcription Hela-S3 cervix
41 chr11:46854800-46861200 Weak transcription HMEC breast
42 chr11:46854800-46861400 Weak transcription NHEK skin
43 chr11:46854800-46861800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr11:46855000-46860800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr11:46856400-46865400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:46856600-46861000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
47 chr11:46856600-46866200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr11:46856600-46866600 Weak transcription Duodenum Mucosa Duodenum
49 chr11:46857000-46866200 Weak transcription Sigmoid Colon Sigmoid Colon
50 chr11:46857200-46861400 Genic enhancers K562 blood

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Last update: Aug 31, 2015