The 2.0 version of rSNPBase

Variant report

Variant rs56362643
Chromosome Location chr9:15271689-15271690
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:15238400-15275400 Weak transcription Fetal Intestine Large intestine
2 chr9:15240600-15275400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr9:15241200-15273400 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr9:15241200-15286200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
5 chr9:15243000-15293400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr9:15244600-15273400 Weak transcription Stomach Mucosa stomach
7 chr9:15249600-15276200 Weak transcription Fetal Kidney kidney
8 chr9:15249800-15276200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr9:15250200-15272200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr9:15250200-15288200 Weak transcription Fetal Stomach stomach
11 chr9:15251000-15272000 Weak transcription Primary T helper naive cells fromperipheralblood blood
12 chr9:15251400-15273600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr9:15252200-15271800 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr9:15253600-15272800 Weak transcription Gastric stomach
15 chr9:15253800-15286400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr9:15254000-15293000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr9:15254200-15275400 Weak transcription Rectal Mucosa Donor 31 rectum
18 chr9:15254200-15276600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr9:15254200-15293000 Weak transcription NHEK skin
20 chr9:15254200-15295600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr9:15257000-15277800 Weak transcription Fetal Lung lung
22 chr9:15257200-15273600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr9:15257400-15275200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
24 chr9:15259200-15293400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr9:15260600-15283000 Weak transcription Colon Smooth Muscle Colon
26 chr9:15261800-15279200 Weak transcription Ovary ovary
27 chr9:15263000-15276200 Weak transcription Duodenum Mucosa Duodenum
28 chr9:15263800-15283000 Weak transcription Aorta Aorta
29 chr9:15264200-15285800 Weak transcription Primary hematopoietic stem cells blood
30 chr9:15266000-15273600 Weak transcription HepG2 liver
31 chr9:15268600-15273400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr9:15268800-15277400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr9:15269000-15272000 Weak transcription Primary T cells from cord blood blood
34 chr9:15269000-15274000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr9:15269200-15273000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr9:15271400-15272200 Strong transcription Breast Myoepithelial Primary Cells Breast
37 chr9:15271400-15273600 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr9:15271600-15272000 Enhancers Primary T cells fromperipheralblood blood
39 chr9:15271600-15273800 Strong transcription Fetal Intestine Small intestine
40 chr9:15271600-15274600 Enhancers Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015