Variant report

Variant rs56399720
Chromosome Location chr9:72354992-72354993
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:72323600-72360800 Strong transcription HUES64 Cell Line embryonic stem cell
2 chr9:72323800-72357600 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr9:72324200-72361000 Strong transcription iPS-20b Cell Line embryonic stem cell
4 chr9:72324600-72359800 Strong transcription HUES48 Cell Line embryonic stem cell
5 chr9:72325000-72358800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr9:72327800-72366800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr9:72330600-72357400 Strong transcription HUES6 Cell Line embryonic stem cell
8 chr9:72333400-72374000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr9:72336600-72359400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr9:72337400-72366400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr9:72342200-72356600 Strong transcription Primary monocytes fromperipheralblood blood
12 chr9:72342200-72356600 Strong transcription Fetal Thymus thymus
13 chr9:72342200-72356800 Strong transcription H1 Cell Line embryonic stem cell
14 chr9:72345400-72359000 Weak transcription Pancreas Pancrea
15 chr9:72346600-72360000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr9:72347000-72364600 Weak transcription Primary T killer memory cells from peripheral blood blood
17 chr9:72347200-72358800 Weak transcription Fetal Heart heart
18 chr9:72347200-72360600 Weak transcription Brain Substantia Nigra brain
19 chr9:72347200-72361600 Weak transcription Ovary ovary
20 chr9:72347200-72364800 Weak transcription Fetal Brain Female brain
21 chr9:72347200-72371400 Weak transcription Small Intestine intestine
22 chr9:72347200-72373400 Weak transcription Esophagus oesophagus
23 chr9:72347200-72373400 Weak transcription Fetal Intestine Small intestine
24 chr9:72347200-72374200 Weak transcription Spleen Spleen
25 chr9:72347400-72361800 Weak transcription Brain Germinal Matrix brain
26 chr9:72347400-72362200 Weak transcription Aorta Aorta
27 chr9:72347400-72374000 Weak transcription Gastric stomach
28 chr9:72347600-72362200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr9:72347600-72362600 Weak transcription Right Ventricle heart
30 chr9:72347600-72368400 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr9:72348200-72361800 Weak transcription Fetal Brain Male brain
32 chr9:72348400-72363800 Weak transcription Brain Cingulate Gyrus brain
33 chr9:72348600-72364000 Weak transcription Colonic Mucosa Colon
34 chr9:72348800-72358800 Weak transcription HepG2 liver
35 chr9:72348800-72359000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr9:72348800-72359800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr9:72348800-72362000 Weak transcription Fetal Muscle Leg muscle
38 chr9:72348800-72362200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr9:72348800-72362200 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr9:72348800-72362400 Weak transcription Lung lung
41 chr9:72348800-72368600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr9:72348800-72373000 Weak transcription Stomach Smooth Muscle stomach
43 chr9:72348800-72373000 Weak transcription NHEK skin
44 chr9:72348800-72373200 Weak transcription Rectal Smooth Muscle rectum
45 chr9:72349000-72355800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr9:72349000-72359000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr9:72349000-72359800 Weak transcription K562 blood
48 chr9:72349000-72360400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
49 chr9:72349000-72360400 Weak transcription Brain Anterior Caudate brain
50 chr9:72349000-72360400 Weak transcription Brain Hippocampus Middle brain

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