The 2.0 version of rSNPBase

Variant report

Variant rs564874433
Chromosome Location chr15:56174166-56174167
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:56148200-56174400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr15:56149000-56177600 Weak transcription Spleen Spleen
3 chr15:56152800-56174600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr15:56153000-56174400 Weak transcription HSMMtube muscle
5 chr15:56153000-56174800 Weak transcription Fetal Intestine Small intestine
6 chr15:56153000-56176400 Weak transcription Esophagus oesophagus
7 chr15:56153600-56178600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr15:56155400-56174800 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr15:56155400-56175600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr15:56158200-56176400 Weak transcription Left Ventricle heart
11 chr15:56161200-56174400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
12 chr15:56161200-56179800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr15:56161400-56174400 Weak transcription NHEK skin
14 chr15:56161400-56174600 Weak transcription Primary T cells from cord blood blood
15 chr15:56161400-56177400 Weak transcription Duodenum Mucosa Duodenum
16 chr15:56161800-56174200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr15:56163400-56174600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr15:56163600-56174400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr15:56165200-56174200 Weak transcription Liver Liver
20 chr15:56165200-56174200 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr15:56165600-56174800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr15:56166000-56174400 Weak transcription Muscle Satellite Cultured Cells --
23 chr15:56166000-56185400 Weak transcription Hela-S3 cervix
24 chr15:56167800-56176200 Weak transcription Psoas Muscle Psoas
25 chr15:56170200-56174400 Weak transcription HSMM muscle
26 chr15:56171400-56174400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr15:56171400-56177600 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr15:56171600-56174600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr15:56171600-56175600 Weak transcription Aorta Aorta
30 chr15:56171800-56176400 Weak transcription HUVEC blood vessel
31 chr15:56172000-56177200 Weak transcription Fetal Stomach stomach
32 chr15:56172000-56177600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr15:56172000-56186200 Weak transcription Osteobl bone
34 chr15:56172200-56174600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr15:56172800-56176400 Weak transcription Stomach Smooth Muscle stomach
36 chr15:56172800-56176800 Weak transcription Pancreas Pancrea
37 chr15:56172800-56189600 Weak transcription Placenta Placenta
38 chr15:56173200-56175600 Weak transcription Right Ventricle heart
39 chr15:56173400-56174800 Enhancers Skeletal Muscle Male skeletal muscle
40 chr15:56174000-56174400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr15:56174000-56174600 Enhancers Primary hematopoietic stem cells blood
42 chr15:56174000-56175600 Genic enhancers A549 lung

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Last update: Aug 31, 2015