The 2.0 version of rSNPBase

Variant report

Variant rs564887257
Chromosome Location chr10:119094591-119094592
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:84 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:119041400-119101200 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr10:119049800-119100600 Weak transcription Stomach Smooth Muscle stomach
3 chr10:119049800-119101400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr10:119049800-119102400 Weak transcription Rectal Smooth Muscle rectum
5 chr10:119050000-119101600 Weak transcription Duodenum Smooth Muscle Duodenum
6 chr10:119063800-119113200 Weak transcription Fetal Thymus thymus
7 chr10:119064600-119098000 Weak transcription HMEC breast
8 chr10:119066800-119111600 Weak transcription Colonic Mucosa Colon
9 chr10:119069400-119104400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr10:119069600-119095200 Weak transcription Ovary ovary
11 chr10:119070400-119094600 Weak transcription Primary T helper cells PMA-I stimulated --
12 chr10:119071600-119099200 Weak transcription NH-A brain
13 chr10:119071600-119106000 Weak transcription Primary T helper naive cells fromperipheralblood blood
14 chr10:119071800-119099200 Weak transcription Hela-S3 cervix
15 chr10:119072000-119111200 Weak transcription Aorta Aorta
16 chr10:119072200-119095200 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr10:119076200-119099800 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr10:119076400-119104800 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr10:119076600-119095000 Weak transcription Primary monocytes fromperipheralblood blood
20 chr10:119078000-119101400 Weak transcription NHDF-Ad bronchial
21 chr10:119078200-119104400 Weak transcription HSMM muscle
22 chr10:119079000-119101800 Weak transcription NHEK skin
23 chr10:119079400-119099200 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr10:119082200-119099800 Weak transcription H9 Cell Line embryonic stem cell
25 chr10:119082400-119118600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr10:119082600-119102000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr10:119083400-119104600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr10:119083600-119098800 Weak transcription Colon Smooth Muscle Colon
29 chr10:119085600-119102000 Weak transcription Pancreas Pancrea
30 chr10:119086000-119102000 Weak transcription Gastric stomach
31 chr10:119086200-119099200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr10:119086400-119097200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr10:119086400-119099000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr10:119086800-119095200 Weak transcription HepG2 liver
35 chr10:119086800-119098800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr10:119086800-119099200 Weak transcription Duodenum Mucosa Duodenum
37 chr10:119087000-119097800 Weak transcription Fetal Kidney kidney
38 chr10:119087000-119100600 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr10:119087200-119094800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr10:119087600-119100000 Weak transcription iPS-18 Cell Line embryonic stem cell
41 chr10:119087800-119097200 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr10:119088000-119101400 Weak transcription Stomach Mucosa stomach
43 chr10:119088600-119100000 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr10:119089000-119096800 Weak transcription Primary neutrophils fromperipheralblood blood
45 chr10:119089800-119102000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr10:119092400-119099400 Weak transcription Fetal Heart heart
47 chr10:119093000-119095800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr10:119093200-119095400 ZNF genes & repeats Pancreatic Islets Pancreatic Islet
49 chr10:119093200-119096200 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
50 chr10:119093400-119094800 ZNF genes & repeats Fetal Muscle Leg muscle

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Last update: Aug 31, 2015