Variant report

Variant rs565248827
Chromosome Location chr11:46940543-46940544
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46938000-46940600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
2 chr11:46938000-46940600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
3 chr11:46938000-46940600 Active TSS Ovary ovary
4 chr11:46938000-46940600 Flanking Bivalent TSS/Enh Thymus Thymus
5 chr11:46938000-46940800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
6 chr11:46938000-46940800 Active TSS H9 Cell Line embryonic stem cell
7 chr11:46938000-46941200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
8 chr11:46938200-46940600 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:46938200-46940600 Active TSS Aorta Aorta
10 chr11:46938200-46941000 Active TSS ES-WA7 Cell Line embryonic stem cell
11 chr11:46938400-46940600 Active TSS Brain Dorsolateral Prefrontal Cortex brain
12 chr11:46938400-46940600 Active TSS Esophagus oesophagus
13 chr11:46938400-46940600 Active TSS Left Ventricle heart
14 chr11:46939000-46940600 Active TSS HSMM muscle
15 chr11:46939200-46940600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr11:46939400-46941600 Enhancers Fetal Brain Male brain
17 chr11:46939600-46940600 Active TSS HUES48 Cell Line embryonic stem cell
18 chr11:46939600-46940600 Active TSS HUES64 Cell Line embryonic stem cell
19 chr11:46939600-46940600 Active TSS Muscle Satellite Cultured Cells --
20 chr11:46939600-46940600 Weak transcription Stomach Mucosa stomach
21 chr11:46939600-46940600 Active TSS HepG2 liver
22 chr11:46939600-46940800 Active TSS iPS-15b Cell Line embryonic stem cell
23 chr11:46939600-46940800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr11:46939600-46941400 Bivalent Enhancer Primary B cells from peripheral blood blood
25 chr11:46939800-46940600 Active TSS Right Ventricle heart
26 chr11:46939800-46940800 Active TSS Colonic Mucosa Colon
27 chr11:46939800-46941000 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
28 chr11:46940000-46940600 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
29 chr11:46940000-46940600 Enhancers Spleen Spleen
30 chr11:46940000-46940800 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
31 chr11:46940000-46941400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
32 chr11:46940200-46940600 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
33 chr11:46940200-46940600 Flanking Active TSS Primary hematopoietic stem cells blood
34 chr11:46940200-46940600 Flanking Bivalent TSS/Enh Primary T regulatory cells fromperipheralblood blood
35 chr11:46940200-46940600 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
36 chr11:46940200-46940600 Enhancers Gastric stomach
37 chr11:46940200-46940600 Enhancers Lung lung
38 chr11:46940200-46940800 Bivalent Enhancer GM12878-XiMat blood
39 chr11:46940200-46941800 Enhancers K562 blood
40 chr11:46940400-46940600 Flanking Active TSS H1 Cell Line embryonic stem cell
41 chr11:46940400-46940600 Flanking Active TSS H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr11:46940400-46940600 Flanking Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr11:46940400-46940600 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:46940400-46940600 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
45 chr11:46940400-46940600 Flanking Active TSS ES-UCSF4 Cell Line embryonic stem cell
46 chr11:46940400-46940600 Flanking Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr11:46940400-46940600 Flanking Active TSS Primary B cells from cord blood blood
48 chr11:46940400-46940600 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
49 chr11:46940400-46940600 Flanking Bivalent TSS/Enh Primary T helper naive cells fromperipheralblood blood
50 chr11:46940400-46940600 Flanking Bivalent TSS/Enh Primary T helper 17 cells PMA-I stimulated --

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