Variant report

Variant	rs566568081
Chromosome Location	chr7:103958204-103958205
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv608065	chr7:103817597-103990755	Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	14 gene(s)	inside rSNPs	diseases
2	nsv608067	chr7:103944237-104029408	Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Bivalent/Poised TSS Weak transcription	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103958200-103958400	Enhancers	H9 Cell Line	embryonic stem cell
2	chr7:103958200-103958400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr7:103958200-103958600	Enhancers	H1 Cell Line	embryonic stem cell
4	chr7:103958200-103958600	Enhancers	iPS-20b Cell Line	embryonic stem cell
5	chr7:103958200-103958800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr7:103958200-103959000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
7	chr7:103958200-103959000	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr7:103958200-103959200	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr7:103958200-103959200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr7:103958200-103959400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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