Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10150071	0.96[ASN][1000 genomes]
rs12884777	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17104975	0.86[ASN][1000 genomes]
rs17105032	0.83[ASN][1000 genomes]
rs17105061	0.83[ASN][1000 genomes]
rs1860105	0.86[ASN][1000 genomes]
rs1989628	0.83[ASN][1000 genomes]
rs2238274	0.86[ASN][1000 genomes]
rs2238275	0.86[ASN][1000 genomes]
rs2238276	0.86[ASN][1000 genomes]
rs2283422	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4902960	0.82[ASN][1000 genomes]
rs4902961	0.97[ASN][1000 genomes]
rs4902965	0.86[ASN][1000 genomes]
rs56731686	0.83[ASN][1000 genomes]
rs58002698	0.86[ASN][1000 genomes]
rs60545259	0.86[ASN][1000 genomes]
rs7143919	0.96[ASN][1000 genomes]
rs7156200	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs720391	0.83[ASN][1000 genomes]
rs73293246	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs74060440	0.95[AFR][1000 genomes];0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs764624	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72457400-72462000	Weak transcription	Right Ventricle	heart
2	chr14:72457600-72462000	Weak transcription	Left Ventricle	heart
3	chr14:72460800-72462200	Strong transcription	Cortex derived primary cultured neurospheres	brain
4	chr14:72461000-72462600	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr14:72461200-72462200	Enhancers	Fetal Heart	heart

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