The 2.0 version of rSNPBase

Variant report

Variant rs56670109
Chromosome Location chr1:94306324-94306325
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94283400-94310000 Weak transcription Skeletal Muscle Male skeletal muscle
2 chr1:94284200-94311200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr1:94290200-94311400 Weak transcription Aorta Aorta
4 chr1:94295400-94310000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr1:94298200-94307000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr1:94299000-94308600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:94299400-94310200 Weak transcription Fetal Muscle Leg muscle
8 chr1:94300600-94309400 Weak transcription Dnd41 blood
9 chr1:94300800-94311600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:94301400-94309600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:94302200-94309600 Weak transcription Placenta Placenta
12 chr1:94302200-94311200 Weak transcription ES-I3 Cell Line embryonic stem cell
13 chr1:94302200-94311200 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr1:94302800-94309600 Weak transcription Primary T cells fromperipheralblood blood
15 chr1:94303200-94309200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:94303200-94310200 Weak transcription Stomach Smooth Muscle stomach
17 chr1:94303800-94306800 Weak transcription Spleen Spleen
18 chr1:94303800-94311600 Weak transcription Gastric stomach
19 chr1:94304000-94311200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:94304200-94311000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:94304400-94310200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
22 chr1:94304600-94306400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:94304800-94306400 Enhancers Muscle Satellite Cultured Cells --
24 chr1:94304800-94306400 Enhancers NHLF lung
25 chr1:94304800-94307000 Enhancers Hela-S3 cervix
26 chr1:94305000-94306600 Enhancers Placenta Amnion Placenta Amnion
27 chr1:94305000-94311000 Weak transcription Left Ventricle heart
28 chr1:94305200-94306400 Enhancers Osteobl bone
29 chr1:94305200-94306800 Weak transcription Skeletal Muscle Female skeletal muscle
30 chr1:94305400-94309800 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:94305600-94308200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
32 chr1:94305600-94310000 Weak transcription NHEK skin
33 chr1:94305600-94310600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:94305600-94311000 Weak transcription HSMMtube muscle
35 chr1:94305800-94307000 Weak transcription NH-A brain
36 chr1:94305800-94307200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr1:94305800-94307400 Strong transcription Breast Myoepithelial Primary Cells Breast
38 chr1:94305800-94308000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr1:94305800-94308000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr1:94305800-94308400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:94305800-94309800 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:94305800-94309800 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:94305800-94310400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:94305800-94311200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
45 chr1:94306000-94307200 Weak transcription NHDF-Ad bronchial
46 chr1:94306000-94308000 Weak transcription HSMM muscle
47 chr1:94306000-94309000 Weak transcription A549 lung
48 chr1:94306000-94309600 Strong transcription HUES6 Cell Line embryonic stem cell
49 chr1:94306000-94309600 Weak transcription Fetal Stomach stomach
50 chr1:94306200-94307000 Strong transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015