Variant report

Variant	rs56708904
Chromosome Location	chr3:23082513-23082514
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11129101	1.00[EUR][1000 genomes]
rs11925573	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11929219	0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12053847	1.00[EUR][1000 genomes]
rs12629336	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12631728	1.00[EUR][1000 genomes]
rs1513226	0.96[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs60226545	1.00[EUR][1000 genomes]
rs73821126	0.94[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73821127	0.94[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7641080	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:23078000-23082800	Weak transcription	Esophagus	oesophagus
2	chr3:23078000-23083400	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr3:23078000-23083400	Weak transcription	HMEC	breast
4	chr3:23078000-23083800	Weak transcription	Left Ventricle	heart
5	chr3:23078400-23083400	Weak transcription	NHEK	skin
6	chr3:23079000-23083600	Weak transcription	Skeletal Muscle Male	skeletal muscle
7	chr3:23079000-23083800	Weak transcription	NHLF	lung
8	chr3:23079000-23085600	Weak transcription	Aorta	Aorta
9	chr3:23079400-23083200	Weak transcription	HSMM	muscle
10	chr3:23080200-23082800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr3:23080400-23082800	Weak transcription	Adipose Nuclei	Adipose
12	chr3:23081200-23083000	Weak transcription	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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