Variant report

Variant	rs567221846
Chromosome Location	chr4:86678366-86678367
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:86678145..86678790-chr4:86717860..86718656,2	MCF-7	breast:
2	chr4:86678039..86678782-chr4:86890252..86890768,2	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv461566	chr4:85988032-86725502	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
2	nsv594747	chr4:85988032-86725502	Enhancers Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
3	nsv470048	chr4:85998783-86720838	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	5 gene(s)	inside rSNPs	diseases
4	esv3450999	chr4:86485840-86773745	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA	2 gene(s)	inside rSNPs	diseases
5	nsv879517	chr4:86677107-86739805	Strong transcription Enhancers Flanking Active TSS Weak transcription Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:86663400-86699800	Weak transcription	Fetal Muscle Trunk	muscle
2	chr4:86666000-86682400	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr4:86670400-86683600	Weak transcription	HSMMtube	muscle
4	chr4:86670600-86680400	Weak transcription	HUVEC	blood vessel
5	chr4:86671600-86681800	Weak transcription	Fetal Muscle Leg	muscle
6	chr4:86673000-86679800	Weak transcription	Primary B cells from cord blood	blood
7	chr4:86673400-86680600	Weak transcription	NHDF-Ad	bronchial
8	chr4:86673400-86682400	Weak transcription	Spleen	Spleen
9	chr4:86673400-86683400	Weak transcription	HSMM	muscle
10	chr4:86673600-86681800	Weak transcription	Right Ventricle	heart
11	chr4:86673600-86683800	Weak transcription	Left Ventricle	heart
12	chr4:86674000-86679000	Weak transcription	Primary B cells from peripheral blood	blood
13	chr4:86674800-86685400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr4:86676200-86680600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr4:86676200-86683000	Weak transcription	Colon Smooth Muscle	Colon
16	chr4:86676400-86682800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr4:86676600-86680400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr4:86676600-86681800	Weak transcription	Adipose Nuclei	Adipose
19	chr4:86676600-86681800	Weak transcription	Pancreas	Pancrea
20	chr4:86676600-86682800	Weak transcription	Brain Anterior Caudate	brain
21	chr4:86676800-86682200	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr4:86676800-86697800	Weak transcription	Primary neutrophils fromperipheralblood	blood
23	chr4:86677800-86678400	Enhancers	Gastric	stomach
24	chr4:86677800-86678400	Enhancers	Right Atrium	heart
25	chr4:86678200-86680400	Weak transcription	Osteobl	bone
26	chr4:86678200-86680600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr4:86678200-86680600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr4:86678200-86682800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr4:86678200-86685200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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