The 2.0 version of rSNPBase

Variant report

Variant rs56731918
Chromosome Location chr15:34478465-34478466
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34454200-34497800 Weak transcription Osteobl bone
2 chr15:34454600-34501200 Weak transcription Colonic Mucosa Colon
3 chr15:34454800-34501000 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr15:34464600-34500400 Weak transcription Hela-S3 cervix
5 chr15:34466400-34500400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr15:34466600-34482800 Weak transcription NHDF-Ad bronchial
7 chr15:34467000-34500800 Weak transcription Primary T helper cells fromperipheralblood blood
8 chr15:34467200-34491400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr15:34467200-34500200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr15:34467400-34486200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr15:34468000-34496400 Weak transcription Fetal Lung lung
12 chr15:34468000-34497800 Weak transcription NHEK skin
13 chr15:34468200-34485800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr15:34468200-34498000 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr15:34468600-34480600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr15:34471000-34501000 Weak transcription Aorta Aorta
17 chr15:34471400-34481000 Weak transcription Brain Angular Gyrus brain
18 chr15:34471600-34500400 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr15:34473000-34480600 Weak transcription Brain Anterior Caudate brain
20 chr15:34473400-34500400 Weak transcription HSMMtube muscle
21 chr15:34475000-34500400 Weak transcription Stomach Smooth Muscle stomach
22 chr15:34475400-34483200 Weak transcription H1 Cell Line embryonic stem cell
23 chr15:34475400-34491600 Weak transcription Placenta Amnion Placenta Amnion
24 chr15:34475600-34478600 Weak transcription Pancreas Pancrea
25 chr15:34475600-34482400 Weak transcription Primary B cells from peripheral blood blood
26 chr15:34475600-34491800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr15:34475600-34493600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr15:34475600-34495600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr15:34475600-34499800 Weak transcription Ovary ovary
30 chr15:34475600-34500000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr15:34475600-34500400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr15:34475600-34500400 Weak transcription Colon Smooth Muscle Colon
33 chr15:34475600-34500400 Weak transcription HUVEC blood vessel
34 chr15:34475800-34480800 Weak transcription Muscle Satellite Cultured Cells --
35 chr15:34475800-34482600 Weak transcription A549 lung
36 chr15:34476000-34491600 Weak transcription Duodenum Mucosa Duodenum
37 chr15:34476000-34491800 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr15:34476200-34499600 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr15:34476200-34500000 Weak transcription Fetal Brain Female brain
40 chr15:34476400-34500800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr15:34476800-34499800 Weak transcription Primary T cells fromperipheralblood blood
42 chr15:34477000-34478600 ZNF genes & repeats Fetal Intestine Small intestine
43 chr15:34477000-34478800 Strong transcription Primary T cells from cord blood blood
44 chr15:34477000-34479400 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr15:34477000-34479600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr15:34477000-34499800 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr15:34477200-34478600 Enhancers Primary neutrophils fromperipheralblood blood
48 chr15:34477200-34479000 Strong transcription Fetal Muscle Trunk muscle
49 chr15:34477200-34480200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr15:34477200-34480800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015