Variant report

Variant	rs567840845
Chromosome Location	chr7:102257615-102257616
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr7:102252129-102257734	GM12892	blood:	n/a	n/a
2	POLR2A	chr7:102257332-102257745	SK-N-MC	brain:	n/a	n/a
3	BATF	chr7:102257362-102257620	GM12878	blood:	n/a	n/a
4	POLR2A	chr7:102257326-102257644	H1-hESC	embryonic stem cell:	n/a	n/a
5	FOSL2	chr7:102257248-102257630	HepG2	liver:	n/a	chr7:102257386-102257395
6	NR2F2	chr7:102255843-102257940	K562	blood:	n/a	chr7:102256070-102256085 chr7:102256997-102257012
7	POLR2A	chr7:102251248-102257739	GM12878	blood:	n/a	n/a
8	POLR2A	chr7:102257368-102257683	GM12878	blood:	n/a	n/a
9	POLR2A	chr7:102256407-102257637	K562	blood:	n/a	n/a
10	POU2F2	chr7:102253473-102257716	GM12878	blood:	n/a	chr7:102254658-102254670 chr7:102254659-102254669 chr7:102253646-102253658 chr7:102254660-102254669 chr7:102256969-102256981 chr7:102254659-102254669
11	SP1	chr7:102256768-102257639	K562	blood:	n/a	chr7:102257409-102257418 chr7:102257359-102257368 chr7:102257405-102257419 chr7:102257286-102257298 chr7:102257360-102257369 chr7:102257410-102257419 chr7:102257288-102257297 chr7:102257287-102257297 chr7:102257287-102257296 chr7:102256872-102256884 chr7:102257358-102257370 chr7:102256873-102256882 chr7:102257028-102257037 chr7:102257292-102257304 chr7:102256846-102256860 chr7:102257410-102257419 chr7:102257294-102257303 chr7:102257358-102257370 chr7:102257408-102257420 chr7:102256873-102256882 chr7:102257287-102257297 chr7:102257409-102257419 chr7:102257027-102257036 chr7:102257292-102257304 chr7:102257286-102257298 chr7:102256874-102256883 chr7:102257293-102257302 chr7:102257408-102257420 chr7:102257328-102257349 chr7:102257287-102257296 chr7:102257409-102257419
12	POLR2A	chr7:102256879-102257710	SK-N-SH	brain:	n/a	n/a
13	POLR2A	chr7:102256822-102257750	U87	brain:	n/a	n/a
14	CBX3	chr7:102257199-102257731	K562	blood:	n/a	n/a
15	SP1	chr7:102256893-102257746	A549	lung:	n/a	chr7:102257409-102257418 chr7:102257359-102257368 chr7:102257405-102257419 chr7:102257286-102257298 chr7:102257360-102257369 chr7:102257410-102257419 chr7:102257288-102257297 chr7:102257287-102257297 chr7:102257287-102257296 chr7:102257358-102257370 chr7:102257028-102257037 chr7:102257292-102257304 chr7:102257410-102257419 chr7:102257294-102257303 chr7:102257358-102257370 chr7:102257408-102257420 chr7:102257287-102257297 chr7:102257409-102257419 chr7:102257027-102257036 chr7:102257292-102257304 chr7:102257286-102257298 chr7:102257293-102257302 chr7:102257408-102257420 chr7:102257328-102257349 chr7:102257287-102257296 chr7:102257409-102257419
16	TCF12	chr7:102257226-102257624	GM12878	blood:	n/a	n/a
17	FOXM1	chr7:102257247-102257827	GM12878	blood:	n/a	n/a
18	JUND	chr7:102256906-102257648	A549	lung:	n/a	chr7:102257386-102257395 chr7:102257182-102257191
19	PAX5	chr7:102257351-102257663	GM12878	blood:	n/a	n/a
20	POLR2A	chr7:102257245-102257616	Hela-S3	cervix:	n/a	n/a
21	SIN3AK20	chr7:102256753-102257638	SK-N-SH	brain:	n/a	n/a
22	SP1	chr7:102256871-102257775	A549	lung:	n/a	chr7:102257409-102257418 chr7:102257359-102257368 chr7:102257405-102257419 chr7:102257286-102257298 chr7:102257360-102257369 chr7:102257410-102257419 chr7:102257288-102257297 chr7:102257287-102257297 chr7:102257287-102257296 chr7:102256872-102256884 chr7:102257358-102257370 chr7:102256873-102256882 chr7:102257028-102257037 chr7:102257292-102257304 chr7:102257410-102257419 chr7:102257294-102257303 chr7:102257358-102257370 chr7:102257408-102257420 chr7:102256873-102256882 chr7:102257287-102257297 chr7:102257409-102257419 chr7:102257027-102257036 chr7:102257292-102257304 chr7:102257286-102257298 chr7:102256874-102256883 chr7:102257293-102257302 chr7:102257408-102257420 chr7:102257328-102257349 chr7:102257287-102257296 chr7:102257409-102257419
23	POLR2A	chr7:102257389-102257633	ProgFib	skin:	n/a	n/a
24	SP1	chr7:102256177-102257715	GM12878	blood:	n/a	chr7:102257409-102257418 chr7:102257359-102257368 chr7:102257405-102257419 chr7:102256505-102256519 chr7:102257286-102257298 chr7:102257360-102257369 chr7:102257410-102257419 chr7:102256701-102256713 chr7:102257288-102257297 chr7:102257287-102257297 chr7:102257287-102257296 chr7:102256872-102256884 chr7:102257358-102257370 chr7:102256703-102256712 chr7:102256873-102256882 chr7:102257028-102257037 chr7:102257292-102257304 chr7:102256846-102256860 chr7:102257410-102257419 chr7:102257294-102257303 chr7:102257358-102257370 chr7:102256702-102256712 chr7:102257408-102257420 chr7:102256873-102256882 chr7:102257287-102257297 chr7:102257409-102257419 chr7:102257027-102257036 chr7:102257292-102257304 chr7:102257286-102257298 chr7:102256701-102256713 chr7:102256702-102256716 chr7:102256874-102256883 chr7:102257293-102257302 chr7:102257408-102257420 chr7:102257328-102257349 chr7:102257287-102257296 chr7:102257409-102257419
25	TRIM28	chr7:102257261-102257767	K562	blood:	n/a	n/a
26	SIN3AK20	chr7:102257257-102257650	HepG2	liver:	n/a	n/a
27	POLR2A	chr7:102257285-102257727	H1-hESC	embryonic stem cell:	n/a	n/a
28	SP1	chr7:102257210-102257710	HepG2	liver:	n/a	chr7:102257409-102257418 chr7:102257359-102257368 chr7:102257405-102257419 chr7:102257286-102257298 chr7:102257360-102257369 chr7:102257410-102257419 chr7:102257288-102257297 chr7:102257287-102257297 chr7:102257287-102257296 chr7:102257358-102257370 chr7:102257292-102257304 chr7:102257410-102257419 chr7:102257294-102257303 chr7:102257358-102257370 chr7:102257408-102257420 chr7:102257287-102257297 chr7:102257409-102257419 chr7:102257292-102257304 chr7:102257286-102257298 chr7:102257293-102257302 chr7:102257408-102257420 chr7:102257328-102257349 chr7:102257287-102257296 chr7:102257409-102257419
29	SIX5	chr7:102257402-102257687	K562	blood:	n/a	n/a
30	POLR2A	chr7:102256083-102257620	GM12878	blood:	n/a	n/a
31	PAX5	chr7:102253568-102257773	GM12878	blood:	n/a	chr7:102256093-102256102
32	SP1	chr7:102257219-102257642	GM12878	blood:	n/a	chr7:102257409-102257418 chr7:102257359-102257368 chr7:102257405-102257419 chr7:102257286-102257298 chr7:102257360-102257369 chr7:102257410-102257419 chr7:102257288-102257297 chr7:102257287-102257297 chr7:102257287-102257296 chr7:102257358-102257370 chr7:102257292-102257304 chr7:102257410-102257419 chr7:102257294-102257303 chr7:102257358-102257370 chr7:102257408-102257420 chr7:102257287-102257297 chr7:102257409-102257419 chr7:102257292-102257304 chr7:102257286-102257298 chr7:102257293-102257302 chr7:102257408-102257420 chr7:102257328-102257349 chr7:102257287-102257296 chr7:102257409-102257419

Variant related genes	Relation type
RASA4	TF binding region

Extended variants
information (count: 212 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:212 , 50 per page) page: 1 2 3 4 5

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1814780	chr7:101912320-102375950	Weak transcription Active TSS Flanking Active TSS Enhancers Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
2	esv1819566	chr7:101912320-102375950	Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
3	esv1822347	chr7:101912320-102375950	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
4	esv1825708	chr7:101912320-102375950	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
5	esv1842898	chr7:101912320-102375950	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
6	esv1847418	chr7:101912320-102375950	Active TSS Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
7	nsv427798	chr7:101912320-102375950	Flanking Active TSS Strong transcription Enhancers Weak transcription Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
8	nsv428182	chr7:101912320-102375950	Strong transcription Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
9	nsv1016563	chr7:101912320-102695860	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
10	nsv1028438	chr7:101912320-102704135	Strong transcription Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	76 gene(s)	inside rSNPs	diseases
11	esv1818954	chr7:101957513-102328097	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
12	esv1828190	chr7:101966669-102439077	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	55 gene(s)	inside rSNPs	diseases
13	esv1829377	chr7:101970299-102330884	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
14	nsv831083	chr7:101981005-102295869	Active TSS Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' Enhancers Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
15	esv1806297	chr7:101981544-102330884	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	45 gene(s)	inside rSNPs	diseases
16	esv1810415	chr7:101993063-102375950	Weak transcription Strong transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
17	esv1811751	chr7:101993063-102375950	Enhancers Genic enhancers Active TSS Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
18	esv1829118	chr7:101993063-102375950	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
19	esv1833155	chr7:101993063-102375950	Genic enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	46 gene(s)	inside rSNPs	diseases
20	esv1832541	chr7:102072448-102328097	Enhancers Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	33 gene(s)	inside rSNPs	diseases
21	nsv1025363	chr7:102072448-102471485	Flanking Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
22	nsv888831	chr7:102082286-102274889	Active TSS Enhancers Genic enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
23	esv1817154	chr7:102083909-102329872	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
24	esv1847127	chr7:102085576-102329872	Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
25	esv1822399	chr7:102085576-102335217	Enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
26	esv1796247	chr7:102087750-102327899	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
27	nsv5879	chr7:102090768-102387803	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
28	nsv8192	chr7:102091052-102333199	Active TSS Strong transcription Weak transcription Genic enhancers Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
29	esv1833186	chr7:102094908-102337526	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
30	nsv888833	chr7:102101269-102334106	Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
31	esv1818955	chr7:102104752-102328097	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
32	esv1807601	chr7:102107765-102332079	Flanking Active TSS Enhancers Weak transcription Strong transcription Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
33	esv1851968	chr7:102108945-102334525	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
34	esv1805492	chr7:102109041-102329872	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
35	esv1830199	chr7:102112311-102324068	Weak transcription Active TSS Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
36	esv1848340	chr7:102112311-102324068	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
37	esv1811777	chr7:102112311-102332079	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
38	esv1824808	chr7:102112311-102332079	Active TSS Weak transcription Strong transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
39	esv1850383	chr7:102112311-102332802	Active TSS Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
40	esv15614	chr7:102113366-102331864	Strong transcription Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
41	esv1811509	chr7:102113376-102330884	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
42	esv1818575	chr7:102113376-102330884	ZNF genes & repeats Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
43	esv1844917	chr7:102113376-102330884	Weak transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
44	esv1828770	chr7:102113376-102332420	Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
45	esv1806600	chr7:102113576-102328097	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
46	esv1813725	chr7:102113576-102328097	Strong transcription Weak transcription Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
47	esv1824802	chr7:102113576-102328097	Weak transcription Active TSS Enhancers Genic enhancers Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
48	esv1851639	chr7:102113576-102328097	Flanking Active TSS Weak transcription Genic enhancers Enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
49	esv1831354	chr7:102113576-102332220	Weak transcription Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
50	esv1798833	chr7:102113874-102329872	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:102252800-102257800	Weak transcription	Brain Substantia Nigra	brain
2	chr7:102254600-102257800	Weak transcription	Primary B cells from peripheral blood	blood
3	chr7:102257000-102257800	Active TSS	H1 Cell Line	embryonic stem cell
4	chr7:102257000-102257800	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr7:102257000-102257800	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr7:102257000-102257800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
7	chr7:102257000-102257800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr7:102257000-102257800	Active TSS	Brain Anterior Caudate	brain
9	chr7:102257000-102257800	Active TSS	Brain Germinal Matrix	brain
10	chr7:102257000-102257800	Active TSS	Brain Hippocampus Middle	brain
11	chr7:102257000-102257800	Enhancers	Fetal Thymus	thymus
12	chr7:102257000-102258000	Enhancers	Primary B cells from cord blood	blood
13	chr7:102257000-102258000	Enhancers	Dnd41	blood
14	chr7:102257000-102258000	Enhancers	HUVEC	blood vessel
15	chr7:102257200-102257800	Active TSS	Fetal Adrenal Gland	Adrenal Gland
16	chr7:102257200-102258000	Enhancers	Primary T cells fromperipheralblood	blood
17	chr7:102257200-102259000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr7:102257200-102259800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
19	chr7:102257400-102257800	Active TSS	Primary hematopoietic stem cells short term culture	blood
20	chr7:102257400-102257800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr7:102257400-102257800	Active TSS	K562	blood
22	chr7:102257400-102257800	Enhancers	Monocytes-CD14+_RO01746	blood
23	chr7:102257400-102258000	Enhancers	Primary T helper naive cells fromperipheralblood	blood
24	chr7:102257400-102259000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr7:102257600-102257800	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
26	chr7:102257600-102257800	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
27	chr7:102257600-102257800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr7:102257600-102257800	Active TSS	Brain Inferior Temporal Lobe	brain
29	chr7:102257600-102257800	Enhancers	Placenta Amnion	Placenta Amnion
30	chr7:102257600-102257800	Flanking Active TSS	Osteobl	bone
31	chr7:102257600-102258000	Enhancers	Adipose Nuclei	Adipose
32	chr7:102257600-102258000	Enhancers	Brain Angular Gyrus	brain
33	chr7:102257600-102258000	Enhancers	Fetal Heart	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links